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authorzimoun <zimon.toutoune@gmail.com>2021-05-21 22:26:17 +0200
committerRicardo Wurmus <rekado@elephly.net>2021-05-31 15:39:00 +0200
commitcc1dbea883fed7515130144a2413c49c11c5352f (patch)
tree7db0fd26d6242047327f225f15c0abab02d5b567 /gnu/packages
parent67e99369c1f96b3eda703702de0fdcfa17d34872 (diff)
downloadguix-cc1dbea883fed7515130144a2413c49c11c5352f.tar.gz
guix-cc1dbea883fed7515130144a2413c49c11c5352f.zip
gnu: r-annotationfilter: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-annotationfilter): Move from here... * gnu/packages/bioconductor.scm (r-annotationfilter): ...to here.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioconductor.scm26
-rw-r--r--gnu/packages/bioinformatics.scm26
2 files changed, 26 insertions, 26 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index faa464d5b7..a6d0350da9 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2009,6 +2009,32 @@ microarrays.")
annotation data packages using SQLite data storage.")
(license license:artistic2.0)))
+(define-public r-annotationfilter
+ (package
+ (name "r-annotationfilter")
+ (version "1.14.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "AnnotationFilter" version))
+ (sha256
+ (base32
+ "0npk0laa2rc93rsh6yikj886zf2fl53a050j07fj9w67j0q0h3s9"))))
+ (properties
+ `((upstream-name . "AnnotationFilter")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-genomicranges" ,r-genomicranges)
+ ("r-lazyeval" ,r-lazyeval)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/Bioconductor/AnnotationFilter")
+ (synopsis "Facilities for filtering Bioconductor annotation resources")
+ (description
+ "This package provides classes and other infrastructure to implement
+filters for manipulating Bioconductor annotation resources. The filters are
+used by @code{ensembldb}, @code{Organism.dplyr}, and other packages.")
+ (license license:artistic2.0)))
+
(define-public r-annotationforge
(package
(name "r-annotationforge")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 24973d3cb4..c144344dc7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8203,32 +8203,6 @@ package, and for letting R applications work on datasets that are larger than
the available RAM.")
(license license:artistic2.0)))
-(define-public r-annotationfilter
- (package
- (name "r-annotationfilter")
- (version "1.14.0")
- (source (origin
- (method url-fetch)
- (uri (bioconductor-uri "AnnotationFilter" version))
- (sha256
- (base32
- "0npk0laa2rc93rsh6yikj886zf2fl53a050j07fj9w67j0q0h3s9"))))
- (properties
- `((upstream-name . "AnnotationFilter")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-genomicranges" ,r-genomicranges)
- ("r-lazyeval" ,r-lazyeval)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
- (home-page "https://github.com/Bioconductor/AnnotationFilter")
- (synopsis "Facilities for filtering Bioconductor annotation resources")
- (description
- "This package provides classes and other infrastructure to implement
-filters for manipulating Bioconductor annotation resources. The filters are
-used by @code{ensembldb}, @code{Organism.dplyr}, and other packages.")
- (license license:artistic2.0)))
-
(define-public emboss
(package
(name "emboss")