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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-09-15 21:04:00 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-09-15 21:07:57 +0200 |
| commit | bb0024dc697c2a4c6f91b59b893e913b02d38e94 (patch) | |
| tree | 22e65fd01ce53fafeec6bf64d9dcab81f1c3f902 /gnu/packages | |
| parent | e5dfcd8e262473a12ae00f5fa1ebf2bd8a90ea89 (diff) | |
| download | guix-bb0024dc697c2a4c6f91b59b893e913b02d38e94.tar.gz guix-bb0024dc697c2a4c6f91b59b893e913b02d38e94.zip | |
gnu: Add r-reqon.
* gnu/packages/bioconductor.scm (r-reqon): New variable.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ce43bfe8b9..9fce21dc00 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5729,6 +5729,31 @@ and parameters of which are trained on a set of aligned reads and a reference genome sequence.") (license license:lgpl3))) +(define-public r-reqon + (package + (name "r-reqon") + (version "1.30.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "ReQON" version)) + (sha256 + (base32 + "04bljr8vgb9z9800d9v8w7a4rvjkwq48zd8n5divq30zj9k2na7a")))) + (properties `((upstream-name . "ReQON"))) + (build-system r-build-system) + (propagated-inputs + `(("r-rjava" ,r-rjava) + ("r-rsamtools" ,r-rsamtools) + ("r-seqbias" ,r-seqbias))) + (home-page "https://bioconductor.org/packages/ReQON/") + (synopsis "Recalibrating quality of nucleotides") + (description + "This package provides an implementation of an algorithm for +recalibrating the base quality scores for aligned sequencing data in BAM +format.") + (license license:gpl2))) + (define-public r-wavcluster (package (name "r-wavcluster") |