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authorRicardo Wurmus <rekado@elephly.net>2016-10-26 09:16:27 +0200
committerRicardo Wurmus <rekado@elephly.net>2016-10-26 09:28:21 +0200
commit51c3c4900fabf4762440a7840bd74b1d7a9c1eb7 (patch)
treeb4f915fb665a7351c9dba127f011cc53b234cc6a /gnu/packages
parente92dd6f5e0c62994ded216260d9877fd19f1ad25 (diff)
downloadguix-51c3c4900fabf4762440a7840bd74b1d7a9c1eb7.tar.gz
guix-51c3c4900fabf4762440a7840bd74b1d7a9c1eb7.zip
gnu: r-genomation: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.6.0. [propagated-inputs]: Add r-rcpp, r-htslib, r-runit, r-s4vectors. [inputs]: Add zlib.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioinformatics.scm10
1 files changed, 8 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 78eb8016bd..f238988f1e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6783,13 +6783,13 @@ reference point and sorted by a user defined feature.")
(define-public r-genomation
(package
(name "r-genomation")
- (version "1.4.2")
+ (version "1.6.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "genomation" version))
(sha256
(base32
- "017hxh3yhizlsswd2vw8504arkckrcgq5zraiw67lldq9wzs5qzg"))))
+ "1m4mz7wihj8yqivwkzw68div8ybk4rjsai3ffki7xp7sh21ax03y"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biostrings" ,r-biostrings)
@@ -6805,11 +6805,17 @@ reference point and sorted by a user defined feature.")
("r-matrixstats" ,r-matrixstats)
("r-plotrix" ,r-plotrix)
("r-plyr" ,r-plyr)
+ ("r-rcpp" ,r-rcpp)
("r-readr" ,r-readr)
("r-reshape2" ,r-reshape2)
+ ("r-rhtslib" ,r-rhtslib)
("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer)
+ ("r-runit" ,r-runit)
+ ("r-s4vectors" ,r-s4vectors)
("r-seqpattern" ,r-seqpattern)))
+ (inputs
+ `(("zlib" ,zlib)))
(home-page "http://bioinformatics.mdc-berlin.de/genomation/")
(synopsis "Summary, annotation and visualization of genomic data")
(description