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authorBen Woodcroft <donttrustben@gmail.com>2015-09-12 22:10:20 +1000
committerRicardo Wurmus <rekado@elephly.net>2015-09-16 23:06:14 +0200
commit41ddebdd2a94da127369ab13fb1ccaf226b30a43 (patch)
tree38af85563749505cd0b08d78c28f93652c078077 /gnu/packages
parente8647227315653728435ba0673cc2aa690c40138 (diff)
downloadguix-41ddebdd2a94da127369ab13fb1ccaf226b30a43.tar.gz
guix-41ddebdd2a94da127369ab13fb1ccaf226b30a43.zip
gnu: Add mafft.
* gnu/packages/bioinformatics.scm (mafft): New variable.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioinformatics.scm58
1 files changed, 58 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 1f3421126c..a13fd7a91d 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1545,6 +1545,64 @@ resolution of binding sites through combining the information of both
sequencing tag position and orientation.")
(license license:bsd-3)))
+(define-public mafft
+ (package
+ (name "mafft")
+ (version "7.221")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append
+ "http://mafft.cbrc.jp/alignment/software/mafft-" version
+ "-without-extensions-src.tgz"))
+ (file-name (string-append name "-" version ".tgz"))
+ (sha256
+ (base32
+ "0xi7klbsgi049vsrk6jiwh9wfj3b770gz3c8c7zwij448v0dr73d"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:tests? #f ; no automated tests, though there are tests in the read me
+ #:make-flags (let ((out (assoc-ref %outputs "out")))
+ (list (string-append "PREFIX=" out)
+ (string-append "BINDIR="
+ (string-append out "/bin"))))
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'enter-dir
+ (lambda _ (chdir "core") #t))
+ (add-after 'enter-dir 'patch-makefile
+ (lambda _
+ ;; on advice from the MAFFT authors, there is no need to
+ ;; distribute mafft-profile, mafft-distance, or
+ ;; mafft-homologs.rb as they are too "specialised".
+ (substitute* "Makefile"
+ ;; remove mafft-homologs.rb from SCRIPTS
+ (("^SCRIPTS = mafft mafft-homologs.rb")
+ "SCRIPTS = mafft")
+ ;; remove mafft-distance from PROGS
+ (("^PROGS = dvtditr dndfast7 dndblast sextet5 mafft-distance")
+ "PROGS = dvtditr dndfast7 dndblast sextet5")
+ ;; remove mafft-profile from PROGS
+ (("splittbfast disttbfast tbfast mafft-profile 2cl mccaskillwrap")
+ "splittbfast disttbfast tbfast f2cl mccaskillwrap")
+ (("^rm -f mafft-profile mafft-profile.exe") "#")
+ (("^rm -f mafft-distance mafft-distance.exe") ")#")
+ ;; do not install MAN pages in libexec folder
+ (("^\t\\$\\(INSTALL\\) -m 644 \\$\\(MANPAGES\\) \
+\\$\\(DESTDIR\\)\\$\\(LIBDIR\\)") "#"))
+ #t))
+ (delete 'configure))))
+ (inputs
+ `(("perl" ,perl)))
+ (home-page "http://mafft.cbrc.jp/alignment/software/")
+ (synopsis "Multiple sequence alignment program")
+ (description
+ "MAFFT offers a range of multiple alignment methods for nucleotide and
+protein sequences. For instance, it offers L-INS-i (accurate; for alignment
+of <~200 sequences) and FFT-NS-2 (fast; for alignment of <~30,000
+sequences).")
+ (license (license:non-copyleft
+ "http://mafft.cbrc.jp/alignment/software/license.txt"
+ "BSD-3 with different formatting"))))
(define-public metabat
(package
generated by cgit
c")) (input-directories (filter-map (lambda (input) (match input ((name . dir) (and (not (member name filters)) dir)))) inputs))) (set-path-environment-variable "CPLUS_INCLUDE_PATH" '("include") input-directories) #t)))))) (home-page "https://compiler-rt.llvm.org") (synopsis "Runtime library for Clang/LLVM") (description "The \"clang-runtime\" library provides the implementations of run-time functions for C and C++ programs. It also provides header files that allow C and C++ source code to interface with the \"sanitization\" passes of the clang compiler. In LLVM this library is called \"compiler-rt\".") (license (package-license llvm)) (properties `((release-monitoring-url . ,%llvm-release-monitoring-url) (upstream-name . "compiler-rt"))) ;; <https://compiler-rt.llvm.org/> doesn't list MIPS as supported. (supported-systems (delete "mips64el-linux" %supported-systems)))) (define* (clang-from-llvm llvm clang-runtime #:optional hash #:key (patches '()) tools-extra (properties (append `((release-monitoring-url . ,%llvm-release-monitoring-url)) (clang-properties (package-version llvm)))) (legacy-build-shared-libs? #f)) "Produce Clang with dependencies on LLVM and CLANG-RUNTIME, and applying the given PATCHES. When TOOLS-EXTRA is given, it must point to the 'clang-tools-extra' tarball, which contains code for 'clang-tidy', 'pp-trace', 'modularize', and other tools. LEGACY-BUILD-SHARED-LIBS? is used to configure the package to use the legacy BUILD_SHARED_LIBS CMake option, which was used until LLVM/Clang 14." (package (name "clang") (version (package-version llvm)) (source (if hash (origin (method url-fetch) (uri (llvm-uri (if (version>=? version "9.0.1") "clang" "cfe") version)) (sha256 (base32 hash)) (patches (map search-patch patches))) (llvm-monorepo (package-version llvm)))) ;; Using cmake allows us to treat llvm as an external library. There ;; doesn't seem to be any way to do this with clang's autotools-based ;; build system. (build-system cmake-build-system) (native-inputs (package-native-inputs llvm)) (inputs `(("libxml2" ,libxml2) ("gcc-lib" ,gcc "lib") ,@(package-inputs llvm) ,@(if tools-extra `(("clang-tools-extra" ,tools-extra)) '()))) (propagated-inputs (list llvm clang-runtime)) (arguments `(#:configure-flags (list "-DCLANG_INCLUDE_TESTS=True" ;; Find libgcc_s, crtbegin.o, and crtend.o. (string-append "-DGCC_INSTALL_PREFIX=" (assoc-ref %build-inputs "gcc-lib")) ;; Use a sane default include directory. (string-append "-DC_INCLUDE_DIRS=" (assoc-ref %build-inputs "libc") "/include") ,@(if (target-riscv64?) (list "-DLIBOMP_LIBFLAGS=-latomic" "-DCMAKE_SHARED_LINKER_FLAGS=-latomic") `()) ,@(if legacy-build-shared-libs? '() (list "-DCLANG_LINK_CLANG_DYLIB=ON"))) ,@(if (target-riscv64?) `(#:make-flags '("LDFLAGS=-latomic")) '()) ;; Don't use '-g' during the build to save space. #:build-type "Release" #:phases (modify-phases %standard-phases ,@(if tools-extra `((add-after 'unpack 'add-tools-extra (lambda* (#:key inputs #:allow-other-keys) ;; Unpack the 'clang-tools-extra' tarball under ;; tools/. (let ((extra (assoc-ref inputs "clang-tools-extra"))) (invoke "tar" "xf" extra) (rename-file ,(string-append "clang-tools-extra-" (string-delete #\- (package-version llvm)) ".src") "tools/extra") ,@(if legacy-build-shared-libs? ;; Build and link to shared libraries. '((substitute* "cmake/modules/AddClang.cmake" (("BUILD_SHARED_LIBS") "True"))) '()) #t)))) '()) (add-after 'unpack 'add-missing-triplets (lambda _ ;; Clang iterates through known triplets to search for ;; GCC's headers, but does not recognize some of the ;; triplets that are used in Guix. (substitute* ,@(if (version>=? version "6.0") '("lib/Driver/ToolChains/Gnu.cpp") '("lib/Driver/ToolChains.cpp")) (("\"aarch64-linux-gnu\"," all) (string-append "\"aarch64-unknown-linux-gnu\", " all)) (("\"arm-linux-gnueabihf\"," all) (string-append all " \"arm-unknown-linux-gnueabihf\",")) (("\"i686-pc-linux-gnu\"," all) (string-append "\"i686-unknown-linux-gnu\", " all))) #t)) (add-after 'unpack 'set-glibc-file-names (lambda* (#:key inputs #:allow-other-keys) (let ((libc (assoc-ref inputs "libc")) (compiler-rt (assoc-ref inputs "clang-runtime")) (gcc (assoc-ref inputs "gcc"))) ,@(cond ((version>=? version "6.0") `(;; Link to libclang_rt files from clang-runtime. (substitute* "lib/Driver/ToolChain.cpp" (("getDriver\\(\\)\\.ResourceDir") (string-append "\"" compiler-rt "\""))) ;; Make "LibDir" refer to <glibc>/lib so that it ;; uses the right dynamic linker file name. (substitute* "lib/Driver/ToolChains/Linux.cpp" (("(^[[:blank:]]+LibDir = ).*" _ declaration) (string-append declaration "\"" libc "/lib\";\n")) ;; Make clang look for libstdc++ in the right ;; location. (("LibStdCXXIncludePathCandidates\\[\\] = \\{") (string-append "LibStdCXXIncludePathCandidates[] = { \"" gcc "/include/c++\",")) ;; Make sure libc's libdir is on the search path, to ;; allow crt1.o & co. to be found. (("@GLIBC_LIBDIR@") (string-append libc "/lib"))))) (else `((substitute* "lib/Driver/Tools.cpp" ;; Patch the 'getLinuxDynamicLinker' function so that ;; it uses the right dynamic linker file name. (("/lib64/ld-linux-x86-64.so.2") (string-append libc ,(glibc-dynamic-linker)))) ;; Link to libclang_rt files from clang-runtime. ;; This substitution needed slight adjustment in 3.8. ,@(if (version>=? version "3.8") '((substitute* "lib/Driver/Tools.cpp" (("TC\\.getDriver\\(\\)\\.ResourceDir") (string-append "\"" compiler-rt "\"")))) '((substitute* "lib/Driver/ToolChain.cpp" (("getDriver\\(\\)\\.ResourceDir") (string-append "\"" compiler-rt "\""))))) ;; Make sure libc's libdir is on the search path, to ;; allow crt1.o & co. to be found. (substitute* "lib/Driver/ToolChains.cpp" (("@GLIBC_LIBDIR@") (string-append libc "/lib")))))) #t))) ,@(if (version>=? version "17") '((add-after 'unpack 'include-test-runner (lambda _ (substitute* "CMakeLists.txt" ((".*llvm_gtest" line) (string-append "add_subdirectory(${LLVM_THIRD_PARTY_DIR}/uni\ ttest third-party/unittest)\n" line)))))) '()) ;; The build daemon goes OOM on i686-linux on this phase. ,@(if (and (version>=? version "15") (target-x86-32?)) '((delete 'make-dynamic-linker-cache)) '()) ;; Awkwardly, multiple phases added after the same phase, ;; e.g. unpack, get applied in the reverse order. In other ;; words, adding 'change-directory last means it occurs ;; first after the unpack phase. ,@(if (version>=? version "14") '((add-after 'unpack 'change-directory (lambda _ (chdir "clang")))) '()) ,@(if (version>=? version "10") `((add-after 'install 'adjust-cmake-file (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) ;; Clang generates a CMake file with "targets" ;; for each installed library file. Downstream ;; consumers of the CMake interface can use this ;; to get absolute library locations. Including ;; this file will needlessly assert that _all_ ;; libraries are available, which causes problems ;; in Guix because some are removed (see the ;; move-extra-tools phase). Thus, remove the ;; asserts so that the main functionality works. (substitute* (string-append out "/lib/cmake/clang/ClangTargets-release.cmake") (("list\\(APPEND _IMPORT_CHECK_TARGETS.*" all) (string-append "# Disabled by Guix.\n#" all))) #t)))) '()) ,@(if (version>? version "3.8") `((add-after 'install 'symlink-cfi_ignorelist (lambda* (#:key inputs outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) (lib-share (string-append out "/lib/clang/" ,version "/share")) (compiler-rt (assoc-ref inputs "clang-runtime")) (file-name ,(if (version>=? version "13") "cfi_ignorelist.txt" "cfi_blacklist.txt")) ;; The location varies between Clang versions. (cfi-ignorelist (cond ((file-exists? (string-append compiler-rt "/" file-name)) (string-append compiler-rt "/" file-name)) (else (string-append compiler-rt "/share/" file-name))))) (mkdir-p lib-share) ;; Symlink the ignorelist to where Clang expects ;; to find it. ;; Not all architectures support CFI. ;; see: compiler-rt/cmake/config-ix.cmake (when (file-exists? cfi-ignorelist) (symlink cfi-ignorelist (string-append lib-share "/" file-name))))))) '()) (add-after 'install 'install-clean-up-/share/clang (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) (compl-dir (string-append out "/etc/bash_completion.d"))) (with-directory-excursion (string-append out "/share/clang") (for-each (lambda (file) (when (file-exists? file) (delete-file file))) ;; Delete extensions for proprietary text editors. '("clang-format-bbedit.applescript" "clang-format-sublime.py" ;; Delete Emacs extensions: see their respective Emacs ;; Guix package instead. "clang-rename.el" "clang-format.el")) ;; Install bash completion. (when (file-exists? "bash-autocomplete.sh") (mkdir-p compl-dir) (rename-file "bash-autocomplete.sh" (string-append compl-dir "/clang"))))) #t))))) ;; Clang supports the same environment variables as GCC. (native-search-paths %gcc-search-paths) (home-page "https://clang.llvm.org") (synopsis "C language family frontend for LLVM") (description "Clang is a compiler front end for the C, C++, Objective-C and Objective-C++ programming languages. It uses LLVM as its back end. The Clang project includes the Clang front end, the Clang static analyzer, and several code analysis tools.") (properties properties) (license (if (version>=? version "9.0") license:asl2.0 ;with LLVM exceptions license:ncsa)))) (define (clang-properties version) "Return package properties for Clang VERSION." `((clang-compiler-cpu-architectures version))) (define-public (make-clang-toolchain clang libomp) (package (name (string-append (package-name clang) "-toolchain")) (version (package-version clang)) (source #f) (build-system trivial-build-system) (arguments '(#:modules ((guix build union)) #:builder (begin (use-modules (ice-9 match) (srfi srfi-26) (guix build union)) (let ((out (assoc-ref %outputs "out"))) (match %build-inputs (((names . directories) ...) (union-build out directories))) ;; Create 'cc' and 'c++' so that one can use it as a ;; drop-in replacement for the default tool chain and ;; have configure scripts find the compiler. (symlink "clang" (string-append out "/bin/cc")) (symlink "clang++" (string-append out "/bin/c++")) (union-build (assoc-ref %outputs "debug") (list (assoc-ref %build-inputs "libc-debug"))) (union-build (assoc-ref %outputs "static") (list (assoc-ref %build-inputs "libc-static"))) #t)))) (native-search-paths (append (package-native-search-paths clang) (list (search-path-specification ;copied from glibc (variable "GUIX_LOCPATH") (files '("lib/locale")))))) (search-paths (package-search-paths clang)) (license (package-license clang)) (properties (package-properties clang)) ;for 'compiler-cpu-architectures' (home-page "https://clang.llvm.org") (synopsis "Complete Clang toolchain for C/C++ development") (description "This package provides a complete Clang toolchain for C/C++ development to be installed in user profiles. This includes Clang, as well as libc (headers and binaries, plus debugging symbols in the @code{debug} output), and Binutils.") (outputs '("out" "debug" "static")) (inputs `(("clang" ,clang) ("ld-wrapper" ,(car (assoc-ref (%final-inputs) "ld-wrapper"))) ("binutils" ,binutils) ("libomp" ,libomp) ;used when linking with '-fopenmp' ("libc" ,glibc) ("libc-debug" ,glibc "debug") ("libc-static" ,glibc "static"))))) (define %llvm-monorepo-hashes '(("14.0.6" . "14f8nlvnmdkp9a9a79wv67jbmafvabczhah8rwnqrgd5g3hfxxxx") ("15.0.7" . "12sggw15sxq1krh1mfk3c1f07h895jlxbcifpwk3pznh4m1rjfy2") ("16.0.6" . "0jxmapg7shwkl88m4mqgfjv4ziqdmnppxhjz6vz51ycp2x4nmjky") ("17.0.6" . "1a7rq3rgw5vxm8y39fyzr4kv7w97lli4a0c1qrkchwk8p0n07hgh") ("18.1.8" . "1l9wm0g9jrpdf309kxjx7xrzf13h81kz8bbp0md14nrz38qll9la"))) (define %llvm-patches '(("14.0.6" . ("clang-14.0-libc-search-path.patch" "clang-runtime-14-glibc-2.36-compat.patch" "clang-14-remove-crypt-interceptors.patch")) ("15.0.7" . ("clang-15.0-libc-search-path.patch" "clang-16-remove-crypt-interceptors.patch")) ("16.0.6" . ("clang-16.0-libc-search-path.patch" "clang-16-remove-crypt-interceptors.patch")) ("17.0.6" . ("clang-17.0-libc-search-path.patch" "clang-17.0-link-dsymutil-latomic.patch")) ("18.1.8" . ("clang-18.0-libc-search-path.patch" "clang-17.0-link-dsymutil-latomic.patch")))) (define (llvm-monorepo version) (origin (method git-fetch) (uri (git-reference (url "https://github.com/llvm/llvm-project") (commit (string-append "llvmorg-" version)))) (file-name (git-file-name "llvm-project" version)) (sha256 (base32 (assoc-ref %llvm-monorepo-hashes version))) (patches (map search-patch (assoc-ref %llvm-patches version))))) ;;; TODO: Make the base llvm all other LLVM inherit from on core-updates. (define-public llvm-15 (package (name "llvm") (version "15.0.7") (source (llvm-monorepo version)) (build-system cmake-build-system) (outputs '("out" "opt-viewer")) (arguments (list #:configure-flags #~(list ;; These options are required for cross-compiling LLVM according ;; to <https://llvm.org/docs/HowToCrossCompileLLVM.html>. #$@(if (%current-target-system) (or (and=> (system->llvm-target-arch) (lambda (llvm-target-arch) #~((string-append "-DLLVM_TABLEGEN=" #+(file-append this-package "/bin/llvm-tblgen")) #$(string-append "-DLLVM_DEFAULT_TARGET_TRIPLE=" (%current-target-system)) #$(string-append "-DLLVM_TARGET_ARCH=" llvm-target-arch) #$(string-append "-DLLVM_TARGETS_TO_BUILD=" (system->llvm-target))))) (raise (condition (&package-unsupported-target-error (package this-package) (target (%current-target-system)))))) '()) ;; Note: sadly, the build system refuses the use of ;; -DBUILD_SHARED_LIBS=ON and the large static archives are needed to ;; build clang-runtime, so we cannot delete them. "-DLLVM_BUILD_LLVM_DYLIB=ON" "-DLLVM_LINK_LLVM_DYLIB=ON" "-DLLVM_ENABLE_FFI=ON" "-DLLVM_ENABLE_RTTI=ON" ;for some third-party utilities "-DLLVM_INSTALL_UTILS=ON" ;needed for rustc "-DLLVM_PARALLEL_LINK_JOBS=1") ;cater to smaller build machines ;; Don't use '-g' during the build, to save space. #:build-type "Release" #:phases #~(modify-phases %standard-phases (add-after 'unpack 'change-directory (lambda _ (chdir "llvm"))) (add-after 'install 'install-opt-viewer (lambda* (#:key outputs #:allow-other-keys) (let* ((opt-viewer-share (string-append #$output:opt-viewer "/share"))) (mkdir-p opt-viewer-share) (rename-file (string-append #$output "/share/opt-viewer") opt-viewer-share))))))) (native-inputs (list python-wrapper perl)) (inputs (list libffi)) (propagated-inputs (list zlib)) ;to use output from llvm-config (home-page "https://www.llvm.org") (synopsis "Optimizing compiler infrastructure") (description "LLVM is a compiler infrastructure designed for compile-time, link-time, runtime, and idle-time optimization of programs from arbitrary programming languages. It currently supports compilation of C and C++ programs, using front-ends derived from GCC 4.0.1. A new front-end for the C family of languages is in development. The compiler infrastructure includes mirror sets of programming tools as well as libraries with equivalent functionality.") (license license:asl2.0) (properties `((release-monitoring-url . ,%llvm-release-monitoring-url))))) (define-public llvm-14 (package (inherit llvm-15) (version "14.0.6") (source (llvm-monorepo version)) (arguments (list #:configure-flags #~(list ;; These options are required for cross-compiling LLVM according ;; to <https://llvm.org/docs/HowToCrossCompileLLVM.html>. #$@(if (%current-target-system) (or (and=> (system->llvm-target-arch) (lambda (llvm-target-arch) #~((string-append "-DLLVM_TABLEGEN=" #+(file-append this-package "/bin/llvm-tblgen")) #$(string-append "-DLLVM_DEFAULT_TARGET_TRIPLE=" (%current-target-system)) #$(string-append "-DLLVM_TARGET_ARCH=" llvm-target-arch) #$(string-append "-DLLVM_TARGETS_TO_BUILD=" (system->llvm-target))))) (raise (condition (&package-unsupported-target-error (package this-package) (target (%current-target-system)))))) '()) ;; undefined reference to `__atomic_fetch_add_8' in lib/libLLVMOrcJIT.so.14 #$@(if (target-ppc32?) (list "-DCMAKE_SHARED_LINKER_FLAGS=-latomic") `()) "-DCMAKE_SKIP_BUILD_RPATH=FALSE" "-DCMAKE_BUILD_WITH_INSTALL_RPATH=FALSE" "-DBUILD_SHARED_LIBS:BOOL=TRUE" "-DLLVM_ENABLE_FFI:BOOL=TRUE" "-DLLVM_ENABLE_RTTI:BOOL=TRUE" ;for some third-party utilities "-DLLVM_INSTALL_UTILS=ON") ;needed for rustc ;; Don't use '-g' during the build, to save space. #:build-type "Release" #:phases #~(modify-phases %standard-phases (add-after 'unpack 'change-directory (lambda _ (chdir "llvm"))) (add-after 'install 'install-opt-viewer (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) (opt-viewer-out (assoc-ref outputs "opt-viewer")) (opt-viewer-share-dir (string-append opt-viewer-out "/share")) (opt-viewer-dir (string-append opt-viewer-share-dir "/opt-viewer"))) (mkdir-p opt-viewer-share-dir) (rename-file (string-append out "/share/opt-viewer") opt-viewer-dir))))))) (native-inputs `(("python" ,python-wrapper) ("perl" ,perl))))) (define-public clang-runtime-15 (clang-runtime-from-llvm llvm-15)) (define-public clang-runtime-14 (clang-runtime-from-llvm llvm-14)) (define-public clang-15 (clang-from-llvm llvm-15 clang-runtime-15 #:tools-extra (origin (method url-fetch) (uri (llvm-uri "clang-tools-extra" (package-version llvm-15))) (sha256 (base32 "1lagnspm5limxh1cp5jlixnzlhf09905d4rqra1kpgj6dps2x6l0"))))) (define-public clang-14 (clang-from-llvm llvm-14 clang-runtime-14 #:legacy-build-shared-libs? #t #:tools-extra (origin (method url-fetch) (uri (llvm-uri "clang-tools-extra" (package-version llvm-14))) (sha256 (base32 "0rhq4wkmvr369nkk059skzzw7jx6qhzqhmiwmqg4sp66avzviwvw"))))) (define-public libomp-15 (package (name "libomp") (version (package-version llvm-15)) (source (llvm-monorepo version)) (build-system cmake-build-system) ;; XXX: Note this gets built with GCC because building with Clang itself ;; fails (missing <atomic>, even when libcxx is added as an input.) (arguments (list #:configure-flags #~(list "-DLIBOMP_USE_HWLOC=ON" "-DOPENMP_TEST_C_COMPILER=clang" "-DOPENMP_TEST_CXX_COMPILER=clang++") #:test-target "check-libomp" #:phases #~(modify-phases %standard-phases (add-after 'unpack 'chdir-to-source-and-install-license (lambda _ (chdir "openmp") (install-file "LICENSE.TXT" (string-append #$output "/share/doc"))))))) (native-inputs (list clang-15 llvm-15 perl pkg-config python)) (inputs (list `(,hwloc "lib"))) (home-page "https://openmp.llvm.org") (synopsis "OpenMP run-time support library") (description "This package provides the run-time support library developed by the LLVM project for the OpenMP multi-theaded programming extension. This package notably provides @file{libgomp.so}, which is has a binary interface compatible with that of libgomp, the GNU Offloading and Multi Processing Library.") (properties `((release-monitoring-url . ,%llvm-release-monitoring-url) (upstream-name . "openmp"))) (license license:expat))) (define-public clang-toolchain-15 (make-clang-toolchain clang-15 libomp-15)) (define-public libomp-14 (package (inherit libomp-15) (version (package-version llvm-14)) (source (origin (method url-fetch) (uri (llvm-uri "openmp" version)) (sha256 (base32 "07zby3gwy5c8jssabrhjk3nsxlwipnm6sk4dsvck1l5d0br1ywsg")) (file-name (string-append "libomp-" version ".tar.xz")))) (arguments (substitute-keyword-arguments (package-arguments libomp-15) ((#:phases phases) #~(modify-phases #$phases (replace 'chdir-to-source-and-install-license (lambda _ (chdir #$(string-append "../openmp-" version ".src")) (install-file "LICENSE.TXT" (string-append #$output "/share/doc")))))))) (native-inputs (modify-inputs (package-native-inputs libomp-15) (replace "clang" clang-14) (replace "llvm" llvm-14))))) (define-public clang-toolchain-14 (make-clang-toolchain clang-14 libomp-14)) (define-public llvm-13 (package (inherit llvm-14) (version "13.0.1") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (sha256 (base32 "0d681xiixmx9inwvz14vi3xsznrcryk06a8rvk9cljiq5kc80szc")))) (arguments (substitute-keyword-arguments (package-arguments llvm-14) ((#:phases phases '%standard-phases) #~(modify-phases #$phases (delete 'change-directory))))) (properties `((release-monitoring-url . ,%llvm-release-monitoring-url))))) (define-public clang-runtime-13 (clang-runtime-from-llvm llvm-13 "1z2xr9nn4mgc3hn9ark2k5y4wznpk47xppkp63bcbagr6589acvv" '("clang-runtime-13-glibc-2.36-compat.patch" "clang-13-remove-crypt-interceptors.patch"))) (define-public clang-13 (clang-from-llvm llvm-13 clang-runtime-13 "1j8pr5kk8iqyb4jds3yl7c6x672617h4ngkpl4575j7mk4nrwykq" #:legacy-build-shared-libs? #t #:patches '("clang-13.0-libc-search-path.patch") #:tools-extra (origin (method url-fetch) (uri (llvm-uri "clang-tools-extra" (package-version llvm-13))) (sha256 (base32 "1l4jjdqfl9hrh0fwzv27hc263zc6x61h09vs4ni3yla8i1cwhayc"))))) (define-public libomp-13 (package (inherit libomp-14) (version (package-version llvm-13)) (source (origin (method url-fetch) (uri (llvm-uri "openmp" version)) (sha256 (base32 "0kvbr4j6ldpssiv7chgqra5y77n7jwbyxlwcl7z32v31f49jcybb")) (file-name (string-append "libomp-" version ".tar.xz")))) (arguments '(#:configure-flags '("-DLIBOMP_USE_HWLOC=ON" "-DOPENMP_TEST_C_COMPILER=clang" "-DOPENMP_TEST_CXX_COMPILER=clang++" ;; Work around faulty target detection, fixed in 14: ;; https://github.com/llvm/llvm-project/issues/52910 "-DLIBOMPTARGET_BUILD_AMDGCN_BCLIB=OFF") #:test-target "check-libomp")) (native-inputs (modify-inputs (package-native-inputs libomp-14) (replace "clang" clang-13) (replace "llvm" llvm-13))))) (define-public clang-toolchain-13 (make-clang-toolchain clang-13 libomp-13)) (define-public llvm-12 (package (inherit llvm-13) (version "12.0.1") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (sha256 (base32 "1pzx9zrmd7r3481sbhwvkms68fwhffpp4mmz45dgrkjpyl2q96kx")))) (arguments (substitute-keyword-arguments (package-arguments llvm-13) ((#:phases phases) #~(modify-phases #$phases #$@(if (assoc "config" (package-native-inputs this-package)) #~((add-after 'unpack 'update-config (lambda* (#:key inputs native-inputs #:allow-other-keys) (let ((config.guess (search-input-file (or inputs native-inputs) "/bin/config.guess"))) (copy-file config.guess "cmake/config.guess"))))) #~()) (add-before 'build 'shared-lib-workaround ;; Even with CMAKE_SKIP_BUILD_RPATH=FALSE, llvm-tblgen ;; doesn't seem to get the correct rpath to be able to run ;; from the build directory. Set LD_LIBRARY_PATH as a ;; workaround. (lambda _ (setenv "LD_LIBRARY_PATH" (string-append (getcwd) "/lib")))))))))) (define-public clang-runtime-12 (clang-runtime-from-llvm llvm-12 "1950rg294izdwkaasi7yjrmadc9mzdd5paf0q63jjcq2m3rdbj5l" '("clang-runtime-13-glibc-2.36-compat.patch"))) (define-public clang-12 (clang-from-llvm llvm-12 clang-runtime-12 "0px4gl27az6cdz6adds89qzdwb1cqpjsfvrldbz9qvpmphrj34bf" #:legacy-build-shared-libs? #t #:patches '("clang-12.0-libc-search-path.patch") #:tools-extra (origin (method url-fetch) (uri (llvm-uri "clang-tools-extra" (package-version llvm-12))) (sha256 (base32 "1r9a4fdz9ci58b5z2inwvm4z4cdp6scrivnaw05dggkxz7yrwrb5"))))) (define-public libomp-12 (package (inherit libomp-13) (version (package-version llvm-12)) (source (origin (method url-fetch) (uri (llvm-uri "openmp" version)) (sha256 (base32 "14dh0r6h2xh747ffgnsl4z08h0ri04azi9vf79cbz7ma1r27kzk0")) (file-name (string-append "libomp-" version ".tar.xz")))) (arguments '(#:configure-flags '("-DLIBOMP_USE_HWLOC=ON" "-DOPENMP_TEST_C_COMPILER=clang" "-DOPENMP_TEST_CXX_COMPILER=clang++") #:test-target "check-libomp")) (native-inputs (modify-inputs (package-native-inputs libomp-13) (replace "clang" clang-12) (replace "llvm" llvm-12))))) (define-public clang-toolchain-12 (make-clang-toolchain clang-12 libomp-12)) (define-public llvm-11 (package (inherit llvm-12) (version "11.1.0") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (patches (search-patches "llvm-8-missing-include.patch")) (sha256 (base32 "199yq3a214avcbi4kk2q0ajriifkvsr0l2dkx3a666m033ihi1ff")))))) (define-public clang-runtime-11 (clang-runtime-from-llvm llvm-11 "0x1j8ngf1zj63wlnns9vlibafq48qcm72p4jpaxkmkb4qw0grwfy" '("clang-runtime-13-glibc-2.36-compat.patch"))) (define-public clang-11 (clang-from-llvm llvm-11 clang-runtime-11 "12sm91qx2m79cvj75a9aazf2x8xybjbd593dv6v7rxficpq8i0ha" #:legacy-build-shared-libs? #t #:patches '("clang-11.0-libc-search-path.patch") #:tools-extra (origin (method url-fetch) (uri (llvm-uri "clang-tools-extra" (package-version llvm-11))) (sha256 (base32 "18n1w1hkv931xzq02b34wglbv6zd6sd0r5kb8piwvag7klj7qw3n"))))) (define-public libomp-11 (package (inherit libomp-12) (version (package-version llvm-11)) (source (origin (method url-fetch) (uri (llvm-uri "openmp" version)) (sha256 (base32 "0bh5cswgpc79awlq8j5i7hp355adaac7s6zaz0zwp6mkflxli1yi")) (file-name (string-append "libomp-" version ".tar.xz")))) (native-inputs (modify-inputs (package-native-inputs libomp-12) (replace "clang" clang-11) (replace "llvm" llvm-11))))) (define-public clang-toolchain-11 (make-clang-toolchain clang-11 libomp-11)) (define-public llvm-10 (package (inherit llvm-11) (version "10.0.1") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (patches (search-patches "llvm-8-missing-include.patch")) (sha256 (base32 "1wydhbp9kyjp5y0rc627imxgkgqiv3dfirbqil9dgpnbaw5y7n65")))) (native-inputs `(("python" ,python-wrapper) ("perl" ,perl) ;; In llvm-11 riscv64 support was added manually to config.guess. ,@(if (target-riscv64?) `(("config" ,config)) '()))))) (define-public clang-runtime-10 (clang-runtime-from-llvm llvm-10 "1yjqjri753w0fzmxcyz687nvd97sbc9rsqrxzpq720na47hwh3fr" '("clang-runtime-13-glibc-2.36-compat.patch"))) (define-public clang-10 (clang-from-llvm llvm-10 clang-runtime-10 "091bvcny2lh32zy8f3m9viayyhb2zannrndni7325rl85cwgr6pr" #:legacy-build-shared-libs? #t #:patches '("clang-10.0-libc-search-path.patch") #:tools-extra (origin (method url-fetch) (uri (llvm-uri "clang-tools-extra" (package-version llvm-10))) (sha256 (base32 "06n1yp638rh24xdxv9v2df0qajxbjz4w59b7dd4ky36drwmpi4yh"))))) (define-public libomp-10 (package (inherit libomp-11) (version (package-version llvm-10)) (source (origin (method url-fetch) (uri (llvm-uri "openmp" version)) (sha256 (base32 "0i4bn84lkpm5w3qkpvwm5z6jdj8fynp7d3bcasa1xyq4is6757yi")) (file-name (string-append "libomp-" version ".tar.xz")))) (native-inputs (modify-inputs (package-native-inputs libomp-11) (replace "clang" clang-10) (replace "llvm" llvm-10))))) (define-public clang-toolchain-10 (make-clang-toolchain clang-10 libomp-10)) (define-public llvm-9 (package (inherit llvm-10) (version "9.0.1") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (sha256 (base32 "16hwp3qa54c3a3v7h8nlw0fh5criqh0hlr1skybyk0cz70gyx880")) (patches (search-patches "llvm-8-missing-include.patch" "llvm-9-fix-bitcast-miscompilation.patch" "llvm-9-fix-scev-miscompilation.patch" "llvm-9-fix-lpad-miscompilation.patch")))) (arguments (if (target-riscv64?) (substitute-keyword-arguments (package-arguments llvm-10) ((#:phases phases) #~(modify-phases #$phases (add-after 'unpack 'patch-dsymutil-link (lambda _ (substitute* "tools/dsymutil/CMakeLists.txt" (("endif\\(APPLE\\)") (string-append "endif(APPLE)\n\n" "if (CMAKE_HOST_SYSTEM_PROCESSOR MATCHES \"riscv64\")\n" " target_link_libraries(dsymutil PRIVATE atomic)\n" "endif()")))))))) (package-arguments llvm-10))))) (define-public clang-runtime-9 (clang-runtime-from-llvm llvm-9 "0xwh79g3zggdabxgnd0bphry75asm1qz7mv3hcqihqwqr6aspgy2" '("clang-runtime-9-libsanitizer-mode-field.patch" "clang-runtime-9-glibc-2.36-compat.patch"))) (define-public clang-9 (clang-from-llvm llvm-9 clang-runtime-9 "0ls2h3iv4finqyflyhry21qhc9cm9ga7g1zq21020p065qmm2y2p" #:legacy-build-shared-libs? #t #:patches '("clang-9.0-libc-search-path.patch"))) (define-public libomp-9 (package (inherit libomp-10) (version (package-version llvm-9)) (source (origin (method url-fetch) (uri (llvm-uri "openmp" version)) (sha256 (base32 "1knafnpp0f7hylx8q20lkd6g1sf0flly572dayc5d5kghh7hd52w")) (file-name (string-append "libomp-" version ".tar.xz")))) (native-inputs (modify-inputs (package-native-inputs libomp-10) (replace "clang" clang-9) (replace "llvm" llvm-9))))) (define-public clang-toolchain-9 (make-clang-toolchain clang-9 libomp-9)) (define-public llvm-8 (package (inherit llvm-9) (version "8.0.1") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (sha256 (base32 "1rvm5gqp5v8hfn17kqws3zhk94w4kxndal12bqa0y57p09nply24")) (patches (search-patches "llvm-8-fix-build-with-gcc-10.patch" "llvm-8-missing-include.patch")))) (license license:ncsa))) (define-public clang-runtime-8 (clang-runtime-from-llvm llvm-8 "0dqqf8f930l8gag4d9qjgn1n0pj0nbv2anviqqhdi1rkhas8z0hi" '("clang-runtime-9-libsanitizer-mode-field.patch" "clang-runtime-9-glibc-2.36-compat.patch"))) (define-public clang-8 (clang-from-llvm llvm-8 clang-runtime-8 "0ihnbdl058gvl2wdy45p5am55bq8ifx8m9mhcsgj9ax8yxlzvvvh" #:legacy-build-shared-libs? #t #:patches '("clang-8.0-libc-search-path.patch"))) (define-public libomp-8 (package (inherit libomp-9) (version (package-version llvm-8)) (source (origin (method url-fetch) (uri (llvm-uri "openmp" version)) (sha256 (base32 "0b3jlxhqbpyd1nqkpxjfggm5d9va5qpyf7d4i5y7n4a1mlydv19y")) (file-name (string-append "libomp-" version ".tar.xz")))) (native-inputs (modify-inputs (package-native-inputs libomp-9) (replace "clang" clang-8) (replace "llvm" llvm-8))) (license license:ncsa))) (define-public clang-toolchain-8 (make-clang-toolchain clang-8 libomp-8)) (define-public llvm-7 (package (inherit llvm-8) (version "7.1.0") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (sha256 (base32 "0r1p5didv4rkgxyvbkyz671xddg6i3dxvbpsi1xxipkla0l9pk0v")))))) (define-public clang-runtime-7 (clang-runtime-from-llvm llvm-7 "1n48p8gjarihkws0i2bay5w9bdwyxyxxbpwyng7ba58jb30dlyq5" '("clang-runtime-9-libsanitizer-mode-field.patch" "clang-runtime-9-glibc-2.36-compat.patch"))) (define-public clang-7 (clang-from-llvm llvm-7 clang-runtime-7 "0vc4i87qwxnw9lci4ayws9spakg0z6w5w670snj9f8g5m9rc8zg9" #:legacy-build-shared-libs? #t #:patches '("clang-7.0-libc-search-path.patch"))) (define-public libomp-7 (package (inherit libomp-8) (version (package-version llvm-7)) (source (origin (method url-fetch) (uri (llvm-uri "openmp" version)) (sha256 (base32 "1dg53wzsci2kra8lh1y0chh60h2l8h1by93br5spzvzlxshkmrqy")) (file-name (string-append "libomp-" version ".tar.xz")))) (native-inputs (modify-inputs (package-native-inputs libomp-8) (replace "clang" clang-7) (replace "llvm" llvm-7))))) (define-public clang-toolchain-7 (make-clang-toolchain clang-7 libomp-7)) (define-public llvm-6 (package (inherit llvm-7) (version "6.0.1") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (sha256 (base32 "1qpls3vk85lydi5b4axl0809fv932qgsqgdgrk098567z4jc7mmn")))))) (define-public clang-runtime-6 (clang-runtime-from-llvm llvm-6 "1fcr3jn24yr8lh36nc0c4ikli4744i2q9m1ik67p1jymwwaixkgl" '("clang-runtime-9-libsanitizer-mode-field.patch" "clang-runtime-9-glibc-2.36-compat.patch"))) (define-public clang-6 (clang-from-llvm llvm-6 clang-runtime-6 "0rxn4rh7rrnsqbdgp4gzc8ishbkryhpl1kd3mpnxzpxxhla3y93w" #:legacy-build-shared-libs? #t #:patches '("clang-6.0-libc-search-path.patch"))) (define-public libomp-6 (package (inherit libomp-7) (version (package-version llvm-6)) (source (origin (method url-fetch) (uri (string-append "https://releases.llvm.org/" version "/openmp-" version ".src.tar.xz")) (sha256 (base32 "0nhwfba9c351r16zgyjyfwdayr98nairky3c2f0b2lc360mwmbv6")) (file-name (string-append "libomp-" version ".tar.xz")))) (native-inputs (modify-inputs (package-native-inputs libomp-7) (replace "clang" clang-6) (replace "llvm" llvm-6))))) (define-public clang-toolchain-6 (make-clang-toolchain clang-6 libomp-6)) (define-public llvm-3.9.1 (package (inherit llvm-6) (name "llvm") (version "3.9.1") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (sha256 (base32 "1vi9sf7rx1q04wj479rsvxayb6z740iaz3qniwp266fgp5a07n8z")))) (outputs '("out")) (arguments (substitute-keyword-arguments (package-arguments llvm) ((#:phases phases) #~(modify-phases #$phases (add-before 'build 'shared-lib-workaround ;; Even with CMAKE_SKIP_BUILD_RPATH=FALSE, llvm-tblgen ;; doesn't seem to get the correct rpath to be able to run ;; from the build directory. Set LD_LIBRARY_PATH as a ;; workaround. (lambda _ (setenv "LD_LIBRARY_PATH" (string-append (getcwd) "/lib")))) (delete 'install-opt-viewer))))))) (define-public clang-runtime-3.9.1 (clang-runtime-from-llvm llvm-3.9.1 "16gc2gdmp5c800qvydrdhsp0bzb97s8wrakl6i8a4lgslnqnf2fk" '("clang-runtime-3.9-libsanitizer-mode-field.patch" "clang-runtime-asan-build-fixes.patch" "clang-runtime-esan-build-fixes.patch" "clang-3.5-libsanitizer-ustat-fix.patch"))) (define-public clang-3.9.1 (clang-from-llvm llvm-3.9.1 clang-runtime-3.9.1 "0qsyyb40iwifhhlx9a3drf8z6ni6zwyk3bvh0kx2gs6yjsxwxi76" #:legacy-build-shared-libs? #t #:patches '("clang-3.8-libc-search-path.patch"))) (define-public llvm-3.8 (package (inherit llvm-3.9.1) (name "llvm") (version "3.8.1") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (sha256 (base32 "1ybmnid4pw2hxn12ax5qa5kl1ldfns0njg8533y3mzslvd5cx0kf")) (patches (search-patches "llvm-3.x.1-fix-build-with-gcc.patch")))))) (define-public clang-runtime-3.8 (clang-runtime-from-llvm llvm-3.8 "0p0y85c7izndbpg2l816z7z7558axq11d5pwkm4h11sdw7d13w0d" '("clang-runtime-asan-build-fixes.patch" "clang-runtime-3.8-libsanitizer-mode-field.patch" "clang-3.5-libsanitizer-ustat-fix.patch"))) (define-public clang-3.8 (clang-from-llvm llvm-3.8 clang-runtime-3.8 "1prc72xmkgx8wrzmrr337776676nhsp1qd3mw2bvb22bzdnq7lsc" #:legacy-build-shared-libs? #t #:patches '("clang-3.8-libc-search-path.patch"))) (define-public llvm-3.7 (package (inherit llvm-3.8) (version "3.7.1") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (sha256 (base32 "1masakdp9g2dan1yrazg7md5am2vacbkb3nahb3dchpc1knr8xxy")) (patches (search-patches "llvm-3.x.1-fix-build-with-gcc.patch")))))) (define-public clang-runtime-3.7 (clang-runtime-from-llvm llvm-3.7 "10c1mz2q4bdq9bqfgr3dirc6hz1h3sq8573srd5q5lr7m7j6jiwx" '("clang-runtime-asan-build-fixes.patch" "clang-runtime-3.8-libsanitizer-mode-field.patch" "clang-3.5-libsanitizer-ustat-fix.patch" "clang-runtime-3.7-fix-build-with-python3.patch"))) (define-public clang-3.7 (clang-from-llvm llvm-3.7 clang-runtime-3.7 "0x065d0w9b51xvdjxwfzjxng0gzpbx45fgiaxpap45ragi61dqjn" #:legacy-build-shared-libs? #t #:patches '("clang-3.5-libc-search-path.patch"))) (define-public llvm-3.6 (package (inherit llvm-3.7) (version "3.6.2") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (patches (search-patches "llvm-3.6-fix-build-with-gcc-10.patch")) (sha256 (base32 "153vcvj8gvgwakzr4j0kndc0b7wn91c2g1vy2vg24s6spxcc23gn")))))) (define-public llvm-3.5 (package (inherit llvm-3.6) (version "3.5.2") (source (origin (method url-fetch) (uri (llvm-uri "llvm" version)) (patches (search-patches "llvm-3.5-fix-clang-build-with-gcc5.patch")) (sha256 (base32 "0xf5q17kkxsrm2gsi93h4pwlv663kji73r2g4asb97klsmb626a4")))))) (define-public clang-runtime-3.5 (let ((runtime (clang-runtime-from-llvm llvm-3.5 "1hsdnzzdr5kglz6fnv3lcsjs222zjsy14y8ax9dy6zqysanplbal" '("clang-runtime-asan-build-fixes.patch" "clang-runtime-3.5-libsanitizer-mode-field.patch" "clang-3.5-libsanitizer-ustat-fix.patch")))) (package/inherit runtime (arguments (substitute-keyword-arguments (package-arguments runtime) ((#:phases phases '%standard-phases) `(modify-phases ,phases ;; glibc no longer includes rpc/xdr.h, so we use the headers from ;; libtirpc. (add-after 'unpack 'find-rpc-includes (lambda* (#:key inputs #:allow-other-keys) (setenv "CPATH" (string-append (search-input-directory inputs "/include/tirpc") ":" (or (getenv "CPATH") ""))) (setenv "CPLUS_INCLUDE_PATH" (string-append (search-input-directory inputs "/include/tirpc") ":" (or (getenv "CPLUS_INCLUDE_PATH") ""))))))))) (inputs `(("libtirpc" ,libtirpc) ("llvm" ,llvm-3.5)))))) (define-public clang-3.5 (clang-from-llvm llvm-3.5 clang-runtime-3.5 "0846h8vn3zlc00jkmvrmy88gc6ql6014c02l4jv78fpvfigmgssg" #:legacy-build-shared-libs? #t #:patches '("clang-3.5-libc-search-path.patch"))) (define-public llvm-16 (package (inherit llvm-15) (version "16.0.6") (source (llvm-monorepo version)) (arguments (substitute-keyword-arguments (package-arguments llvm-15) ;; The build daemon goes OOM on i686-linux on this phase. ((#:phases phases #~'%standard-phases) (if (target-x86-32?) #~(modify-phases #$phases (delete 'make-dynamic-linker-cache)) phases)))))) (define-public clang-runtime-16 (clang-runtime-from-llvm llvm-16)) (define-public clang-16 (clang-from-llvm llvm-16 clang-runtime-16 #:tools-extra (origin (method url-fetch) (uri (llvm-uri "clang-tools-extra" (package-version llvm-16))) (sha256 (base32 "0cbgffciql06a1i0ybyyqbnkkr4g7x8cxaar5a5v3415vd27hk0p"))))) (define-public libomp-16 (package (inherit libomp-15) (version (package-version llvm-16)) (source (llvm-monorepo version)) (native-inputs (modify-inputs (package-native-inputs libomp-15) (replace "clang" clang-16) (replace "llvm" llvm-16))))) (define-public clang-toolchain-16 (make-clang-toolchain clang-16 libomp-16)) (define-public llvm-17 (package (inherit llvm-15) (version "17.0.6") (source (llvm-monorepo version)) (arguments (substitute-keyword-arguments (package-arguments llvm-15) ;; The build daemon goes OOM on i686-linux on this phase. ((#:phases phases #~'%standard-phases) (if (target-x86-32?) #~(modify-phases #$phases (delete 'make-dynamic-linker-cache)) phases)))))) (define-public clang-runtime-17 (clang-runtime-from-llvm llvm-17)) (define-public clang-17 (clang-from-llvm llvm-17 clang-runtime-17 #:tools-extra (origin (method url-fetch) (uri (llvm-uri "clang-tools-extra" (package-version llvm-17))) (sha256 (base32 "1f8szx762c325916gjxb5lw7zxyidynwnvx6fxxqscsx8514cxxa"))))) (define-public libomp-17 (package (inherit libomp-15) (version (package-version llvm-17)) (source (llvm-monorepo version)) (native-inputs (modify-inputs (package-native-inputs libomp-15) (replace "clang" clang-17) (replace "llvm" llvm-17))))) (define-public clang-toolchain-17 (make-clang-toolchain clang-17 libomp-17)) (define-public llvm-18 (package (inherit llvm-15) (version "18.1.8") (source (llvm-monorepo version)) (arguments (substitute-keyword-arguments (package-arguments llvm-15) ;; The build daemon goes OOM on i686-linux on this phase. ((#:phases phases #~'%standard-phases) (if (target-x86-32?) #~(modify-phases #$phases (delete 'make-dynamic-linker-cache)) phases)))))) (define-public clang-runtime-18 (clang-runtime-from-llvm llvm-18)) (define-public clang-18 (clang-from-llvm llvm-18 clang-runtime-18 #:tools-extra (origin (method url-fetch) (uri (llvm-uri "clang-tools-extra" (package-version llvm-18))) (sha256 (base32 "1wd7y1a0db4y51swlq6dmm9hrv8pvmv158yi9f10dlayv7y7g275"))))) (define-public libomp-18 (package (inherit libomp-15) (version (package-version llvm-18)) (source (llvm-monorepo version)) (native-inputs (modify-inputs (package-native-inputs libomp-15) (replace "clang" clang-18) (replace "llvm" llvm-18))))) (define-public clang-toolchain-18 (make-clang-toolchain clang-18 libomp-18)) ;; Default LLVM and Clang version. (define-public libomp libomp-13) (define-public llvm llvm-13) (define-public clang-runtime clang-runtime-13) (define-public clang clang-13) (define-public clang-toolchain clang-toolchain-13) (define-public llvm-for-rocm (package ;; Based on LLVM 14 as of v5.0.0 (inherit llvm-14) (name "llvm-for-rocm") (version "5.6.0") ;this must match '%rocm-version' (source (origin (method git-fetch) (uri (git-reference (url "https://github.com/RadeonOpenCompute/llvm-project.git") (commit (string-append "rocm-" version)))) (file-name (git-file-name name version)) (sha256 (base32 "1kg6q6aqijjrwaznj0gr3nd01gykrnqqnk8vz8wyfifr18l9jrgx")))) (arguments (substitute-keyword-arguments (package-arguments llvm-14) ((#:configure-flags flags) #~(list"-DLLVM_ENABLE_PROJECTS=llvm;clang;lld" "-DLLVM_TARGETS_TO_BUILD=AMDGPU;X86" "-DCMAKE_SKIP_BUILD_RPATH=FALSE" "-DCMAKE_BUILD_WITH_INSTALL_RPATH=FALSE" "-DBUILD_SHARED_LIBS:BOOL=TRUE" "-DLLVM_VERSION_SUFFIX=")))) (properties `((hidden? . #t) ,@(package-properties llvm-14))))) (define-public libunwind-headers (package (name "libunwind-headers") (version "13.0.0") (source (origin (method url-fetch) (uri (llvm-uri "libunwind" version)) (sha256 (base32 "1qb5ickp7qims5q7sxacj3fwq1kklvnl94k3v9hpl5qn284iky1n")))) (build-system cmake-build-system) (arguments '(#:phases (modify-phases (map (lambda (phase) (assq phase %standard-phases)) '(set-paths unpack)) (add-after 'unpack 'install (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) (mkdir out) (copy-recursively "include" (string-append out "/include")))))))) (home-page "https://clang.llvm.org/docs/Toolchain.html") (synopsis "LLVM libunwind header files") (description "This package contains header files for the LLVM C++ unwinding library.") (properties `((release-monitoring-url . ,%llvm-release-monitoring-url))) (license license:asl2.0))) ;with LLVM exceptions (define-public lld-15 (package (name "lld") (version (package-version llvm-15)) (source (llvm-monorepo version)) (build-system cmake-build-system) (inputs (list llvm-15)) (arguments '(#:build-type "Release" ;; TODO: Tests require the lit tool, which isn't installed by the LLVM ;; package. #:tests? #f #:phases (modify-phases %standard-phases (add-after 'unpack 'change-directory (lambda _ (chdir "lld")))))) (home-page "https://lld.llvm.org/") (synopsis "Linker from the LLVM project") (description "LLD is a high-performance linker, built as a set of reusable components which highly leverage existing libraries in the larger LLVM Project.") (license license:asl2.0))) ; With LLVM exception (define-public lld-14 (package (inherit lld-15) (version "14.0.6") (source (llvm-monorepo version)) (inputs (list llvm-14)))) (define-public lld-13 (package (inherit lld-14) (version "13.0.1") (source (origin (method url-fetch) (uri (llvm-uri "lld" version)) (sha256 (base32 "1yscckcszfr234k4svhybdbsnz6w65x8pldl6c2nhyxzx12zfsk6")))) (native-inputs ;; Note: check <https://bugs.llvm.org/show_bug.cgi?id=49228> to see ;; whether this is still necessary. (list libunwind-headers)) (inputs (list llvm-13)) (arguments '(#:build-type "Release" ;; TODO: Tests require the lit tool, which isn't installed by the LLVM ;; package. #:tests? #f)) (properties `((release-monitoring-url . ,%llvm-release-monitoring-url))))) (define-public lld-12 (package (inherit lld-13) (version "12.0.1") (source (origin (method url-fetch) (uri (llvm-uri "lld" version)) (sha256 (base32 "0qg3fgc7wj34hdkqn21y03zcmsdd01szhhm1hfki63iifrm3y2v9")))) (inputs (modify-inputs (package-inputs lld) (replace "llvm" llvm-12))))) (define-public lld-11 (package (inherit lld-12) (version "11.0.0") (source (origin (method url-fetch) (uri (llvm-uri "lld" version)) (sha256 (base32 "077xyh7sij6mhp4dc4kdcmp9whrpz332fa12rwxnzp3wgd5bxrzg")))) (inputs (modify-inputs (package-inputs lld) (replace "llvm" llvm-11))))) (define-public lld-16 (package (inherit lld-15) (version (package-version llvm-16)) (source (llvm-monorepo version)) (inputs (list llvm-16)))) (define-public lld-17 (package (inherit lld-15) (version (package-version llvm-17)) (source (llvm-monorepo version)) (inputs (list llvm-17)))) (define-public lld-18 (package (inherit lld-15) (version (package-version llvm-18)) (source (llvm-monorepo version)) (inputs (list llvm-18)))) (define-public lld lld-14) (define* (make-lld-wrapper lld #:key lld-as-ld?) "Return a LLD wrapper. When LLD-AS-LD? is true, create a 'ld' symlink that points to 'lld'." (package (inherit lld) (name (if lld-as-ld? "lld-as-ld-wrapper" "lld-wrapper")) (source #f) (native-inputs '()) (inputs (list (make-ld-wrapper "ld.lld-wrapper" #:binutils lld #:linker "ld.lld") (make-ld-wrapper "lld-wrapper" #:binutils lld #:linker "lld"))) (propagated-inputs '()) (build-system trivial-build-system) (arguments (list #:builder #~(let ((ld.lld (string-append #$(this-package-input "ld.lld-wrapper") "/bin/ld.lld")) (lld (string-append #$(this-package-input "lld-wrapper") "/bin/lld"))) (mkdir #$output) (mkdir (string-append #$output "/bin")) (symlink ld.lld (string-append #$output "/bin/ld.lld")) (symlink lld (string-append #$output "/bin/lld")) (when #$lld-as-ld? (symlink ld.lld (string-append #$output "/bin/ld")))))) (synopsis "LLD linker wrapper") (description "This is a linker wrapper for LLD; like @code{ld-wrapper}, it wraps the linker to add any missing @code{-rpath} flags, and to detect any misuse of libraries outside of the store."))) ;;; A LLD wrapper suitable to use with -fuse-ld and GCC or with Clang. (define-public lld-wrapper (make-lld-wrapper lld)) ;;; A LLD wrapper that can be used as a (near) drop-in replacement to GNU ld. (define-public lld-as-ld-wrapper-15 (make-lld-wrapper lld-15 #:lld-as-ld? #t)) (define-public lld-as-ld-wrapper (make-lld-wrapper lld #:lld-as-ld? #t)) (define-public lldb (package (name "lldb") (version (package-version llvm-17)) (source (llvm-monorepo version)) (build-system cmake-build-system) (arguments (list #:configure-flags #~(list "-DOPENMP_TEST_CXX_COMPILER=clang++") #:phases #~(modify-phases %standard-phases (add-after 'unpack 'chdir-to-source (lambda _ (chdir "lldb")))))) (native-inputs (list pkg-config swig)) (inputs (list clang-17 llvm-17 ;; Optional (but recommended) inputs. ncurses libedit xz libxml2 lua python)) (home-page "https://lldb.llvm.org/") (synopsis "Low level debugger") (description "LLDB is a high performance debugger built as a set of reusable components which highly leverage existing libraries in the larger LLVM project.") (properties `((release-monitoring-url . ,%llvm-release-monitoring-url))) (license license:asl2.0))) ;with LLVM exceptions (define-public libcxx (package (name "libcxx") (version (package-version llvm-15)) (source (llvm-monorepo version)) (build-system cmake-build-system) (arguments (list #:tests? #f #:configure-flags #~(list "-DLLVM_ENABLE_RUNTIMES=libcxx;libcxxabi" "-DCMAKE_C_COMPILER=clang" "-DCMAKE_CXX_COMPILER=clang++" ;; libc++.so is actually a GNU ld style linker script, however, ;; CMake still tries to fix the RUNPATH of it during the install ;; step. This argument tells CMake to use the install directory ;; as RUNPATH and don't attempt to patch it. ;; See also: https://gitlab.kitware.com/cmake/cmake/-/issues/22963 "-DCMAKE_BUILD_WITH_INSTALL_RPATH=TRUE") #:phases #~(modify-phases %standard-phases (add-after 'unpack 'enter-subdirectory (lambda _ (chdir "runtimes"))) (add-after 'set-paths 'adjust-CPLUS_INCLUDE_PATH (lambda* (#:key inputs #:allow-other-keys) (let ((gcc (assoc-ref inputs "gcc"))) ;; Hide GCC's C++ headers so that they do not interfere with ;; the ones we are attempting to build. (setenv "CPLUS_INCLUDE_PATH" (string-join (delete (string-append gcc "/include/c++") (string-split (getenv "CPLUS_INCLUDE_PATH") #\:)) ":")) (format #t "environment variable `CPLUS_INCLUDE_PATH' changed to ~a~%" (getenv "CPLUS_INCLUDE_PATH")) #t)))))) (native-inputs (list clang llvm python)) (home-page "https://libcxx.llvm.org") (synopsis "C++ standard library") (description "This package provides an implementation of the C++ standard library for use with Clang, targeting C++11, C++14 and above.") (properties `((release-monitoring-url . ,%llvm-release-monitoring-url))) (license license:expat))) ;; Libcxx files specifically used by PySide2. (define-public libcxx-6 (package (inherit libcxx) (version (package-version llvm-6)) (source (origin (method url-fetch) (uri (llvm-uri "libcxx" version)) (sha256 (base32 "0rzw4qvxp6qx4l4h9amrq02gp7hbg8lw4m0sy3k60f50234gnm3n")))) (arguments (list #:phases #~(modify-phases %standard-phases (add-after 'set-paths 'adjust-CPLUS_INCLUDE_PATH (lambda* (#:key inputs #:allow-other-keys) (let ((gcc (assoc-ref inputs "gcc"))) ;; Hide GCC's C++ headers so that they do not interfere with ;; the ones we are attempting to build. (setenv "CPLUS_INCLUDE_PATH" (string-join (delete (string-append gcc "/include/c++") (string-split (getenv "CPLUS_INCLUDE_PATH") #\:)) ":")) (format #t "environment variable `CPLUS_INCLUDE_PATH' changed to ~a~%" (getenv "CPLUS_INCLUDE_PATH")) #t)))))) (native-inputs (list clang-6 llvm-6)))) (define-public libcxxabi-6 (package (name "libcxxabi") (version "6.0.1") (source (origin (method git-fetch) (uri (git-reference (url "https://github.com/llvm/llvm-project") (commit (string-append "llvmorg-" version)))) (file-name (git-file-name name version)) (sha256 (base32 "0ki6796b5z08kh3a3rbysr5wwb2dkl6wal5dzd03i4li5xfkvx1g")))) (build-system cmake-build-system) (arguments (list #:configure-flags #~(list (string-append "-DLIBCXXABI_LIBCXX_INCLUDES=" #$(this-package-native-input "libcxx") "/include") "-DCMAKE_C_COMPILER=clang" "-DCMAKE_CXX_COMPILER=clang++") #:phases #~(modify-phases (@ (guix build cmake-build-system) %standard-phases) (add-after 'unpack 'chdir (lambda _ (chdir "libcxxabi"))) (add-after 'set-paths 'adjust-CPLUS_INCLUDE_PATH (lambda* (#:key inputs #:allow-other-keys) (let ((gcc (assoc-ref inputs "gcc"))) ;; Hide GCC's C++ headers so that they do not interfere with ;; the ones we are attempting to build. (setenv "CPLUS_INCLUDE_PATH" (string-join (cons (string-append (assoc-ref inputs "libcxx") "/include/c++/v1") (delete (string-append gcc "/include/c++") (string-split (getenv "CPLUS_INCLUDE_PATH") #\:))) ":")) (format #true "environment variable `CPLUS_INCLUDE_PATH' changed to ~a~%" (getenv "CPLUS_INCLUDE_PATH"))))) (add-after 'install 'install-headers (lambda* (#:key outputs #:allow-other-keys) (let ((include-dir (string-append (assoc-ref outputs "out") "/include"))) (install-file "../libcxxabi/include/__cxxabi_config.h" include-dir) (install-file "../libcxxabi/include/cxxabi.h" include-dir))))))) (native-inputs (list clang-6 llvm-6 libcxx-6)) (home-page "https://libcxxabi.llvm.org") (synopsis "C++ standard library support") (description "This package provides an implementation of low level support for a standard C++ library.") (license license:expat))) (define-public libcxx+libcxxabi-6 (package (inherit libcxx-6) (name "libcxx+libcxxabi") (version (package-version libcxx-6)) (arguments (list #:configure-flags #~(list "-DLIBCXX_CXX_ABI=libcxxabi" (string-append "-DLIBCXX_CXX_ABI_INCLUDE_PATHS=" #$(this-package-native-input "libcxxabi") "/include")) #:phases #~(modify-phases (@ (guix build cmake-build-system) %standard-phases) (add-after 'set-paths 'adjust-CPLUS_INCLUDE_PATH (lambda* (#:key inputs #:allow-other-keys) (let ((gcc (assoc-ref inputs "gcc"))) ;; Hide GCC's C++ headers so that they do not interfere with ;; the ones we are attempting to build. (setenv "CPLUS_INCLUDE_PATH" (string-join (delete (string-append gcc "/include/c++") (string-split (getenv "CPLUS_INCLUDE_PATH") #\:)) ":")) (format #true "environment variable `CPLUS_INCLUDE_PATH' changed to ~a~%" (getenv "CPLUS_INCLUDE_PATH")))))))) (native-inputs (list clang-6 llvm-6 libcxxabi-6)))) ;; WARNING: This package is a dependency of mesa. (define-public libclc (package (name "libclc") (version (package-version llvm-18)) (source (llvm-monorepo version)) (build-system cmake-build-system) (arguments (list #:configure-flags #~(list (string-append "-DLLVM_CLANG=" (assoc-ref %build-inputs "clang") "/bin/clang") (string-append "-DLLVM_SPIRV=" (assoc-ref %build-inputs "spirv-llvm-translator") "/bin/llvm-spirv")) #:phases #~(modify-phases %standard-phases (add-after 'unpack 'enter-subdirectory (lambda _ (chdir "libclc"))) (add-after 'enter-subdirectory 'skip-clspv-tests (lambda _ (substitute* "CMakeLists.txt" (("ptx\\.\\*") "[ptx|clspv].*"))))))) (propagated-inputs (list spirv-llvm-translator spirv-tools)) (native-inputs (list clang-18 llvm-18 python)) (home-page "https://libclc.llvm.org") (synopsis "Libraries for the OpenCL programming language") (description "This package provides an implementation of the OpenCL library requirements according to version 1.1 of the OpenCL specification.") (properties `((release-monitoring-url . ,%llvm-release-monitoring-url))) ;; Apache license 2.0 with LLVM exception (license license:asl2.0))) (define-public python-llvmlite (package (name "python-llvmlite") (version "0.39.1") (source (origin (method url-fetch) (uri (pypi-uri "llvmlite" version)) (sha256 (base32 "0wnm0l0301sj8xp6skg3ci1gii56x5dk6l2x88f2c1g8h9ybsfml")))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases (add-before 'build 'set-compiler/linker-flags (lambda* (#:key inputs #:allow-other-keys) (let ((llvm (assoc-ref inputs "llvm"))) ;; Refer to ffi/Makefile.linux. (setenv "CPPFLAGS" "-fPIC") (setenv "LDFLAGS" (string-append "-Wl,-rpath=" llvm "/lib")))))))) (inputs (list (let* ((patches-commit "a4a19e8af2c5ef9b9901f20193e4be070726da97") (patch-uri (lambda (name) (string-append "https://raw.githubusercontent.com/numba/" "llvmlite/" patches-commit "/conda-recipes/" name))) (patch-origin (lambda (name hash) (origin (method url-fetch) (uri (patch-uri name)) (sha256 (base32 hash))))) (arch-independent-patches (list (patch-origin "partial-testing.patch" "0g3nkci87knvmn7piqhmh4bcc65ff8r921cvfcibyiv65klv3syg") (patch-origin "0001-Revert-Limit-size-of-non-GlobalValue-name.patch" "0n4k7za0smx6qwdipsh6x5lm7bfvzzb3p9r8q1zq1dqi4na21295")))) (package (inherit llvm-11) (source (origin (inherit (package-source llvm-11)) (patches (if (string=? "aarch64-linux" (%current-system)) `(,(patch-origin "intel-D47188-svml-VF_LLVM9.patch" "0gnnlfxr8p1a7ls93hzcpfqpa8r0icypfwj8l9cmkslq5sz8p64r") ,@arch-independent-patches ,@(origin-patches (package-source llvm-11))) `(,(patch-origin "intel-D47188-svml-VF.patch" "0gnnlfxr8p1a7ls93hzcpfqpa8r0icypfwj8l9cmkslq5sz8p64r") ,(patch-origin "expect-fastmath-entrypoints-in-add-TLI-mappings.ll.patch" "0jxhjkkwwi1cy898l2n57l73ckpw0v73lqnrifp7r1mwpsh624nv") ,@arch-independent-patches ,@(origin-patches (package-source llvm-11))))))))))) (home-page "https://llvmlite.pydata.org") (synopsis "Wrapper around basic LLVM functionality") (description "This package provides a Python binding to LLVM for use in Numba.") (license license:bsd-3))) (define-public (clang-python-bindings clang) "Return a package for the Python bindings of CLANG." (package (inherit clang) (name "python-clang") (build-system python-build-system) (outputs '("out")) (arguments (list #:phases #~(modify-phases %standard-phases (add-before 'build 'change-directory (lambda _ (chdir "bindings/python"))) (add-before 'build 'create-setup-py (lambda _ ;; Generate a basic "setup.py", enough so it can be ;; built and installed. (with-output-to-file "setup.py" (lambda () (format #true "from setuptools import setup setup(name=\"clang\", version=\"~a\", packages=[\"clang\"])\n" #$(package-version this-package)))))) (add-before 'build 'set-libclang-file-name (lambda* (#:key inputs #:allow-other-keys) ;; Record the absolute file name of libclang.so. (let ((libclang (search-input-file inputs "/lib/libclang.so"))) (substitute* "clang/cindex.py" (("libclang\\.so") libclang)))))))) (inputs (list clang)) (synopsis "Python bindings to libclang"))) (define-public python-clang-10 (clang-python-bindings clang-10)) (define-public python-clang-11 (clang-python-bindings clang-11)) (define-public python-clang-12 (clang-python-bindings clang-12)) (define-public python-clang-13 (clang-python-bindings clang-13)) (define-public emacs-clang-format (package (inherit clang) (name "emacs-clang-format") (build-system emacs-build-system) (inputs (list clang)) (propagated-inputs '()) (arguments `(#:phases (modify-phases %standard-phases (add-after 'unpack 'configure (lambda* (#:key inputs #:allow-other-keys) (let ((clang-format (search-input-file inputs "/bin/clang-format"))) (copy-file "tools/clang-format/clang-format.el" "clang-format.el") (emacs-substitute-variables "clang-format.el" ("clang-format-executable" clang-format)))))))) (synopsis "Format code using clang-format") (description "This package filters code through @code{clang-format} to fix its formatting. @code{clang-format} is a tool that formats C/C++/Obj-C code according to a set of style options, see @url{https://clang.llvm.org/docs/ClangFormatStyleOptions.html}."))) (define-public emacs-clang-rename (package (inherit clang) (name "emacs-clang-rename") (build-system emacs-build-system) (inputs (list clang)) (arguments `(#:phases (modify-phases %standard-phases (add-after 'unpack 'configure (lambda* (#:key inputs #:allow-other-keys) (let ((clang-rename (search-input-file inputs "/bin/clang-rename"))) (copy-file "tools/clang-rename/clang-rename.el" "clang-rename.el") (emacs-substitute-variables "clang-rename.el" ("clang-rename-binary" clang-rename)))))))) (synopsis "Rename every occurrence of a symbol using clang-rename") (description "This package renames every occurrence of a symbol at point using @code{clang-rename}."))) ;;; ;;; LLVM variants. ;;; (define-public llvm-for-mesa ;; Note: update the 'clang' input of mesa-opencl when bumping this. (let ((base-llvm llvm-15)) (package (inherit base-llvm) (name "llvm-for-mesa") (arguments (substitute-keyword-arguments (package-arguments base-llvm) ((#:modules modules '((guix build cmake-build-system) (guix build utils))) `((ice-9 regex) (srfi srfi-1) (srfi srfi-26) ,@modules)) ((#:configure-flags cf ''()) #~(cons* ;; AMDGPU is needed by the vulkan drivers. #$(string-append "-DLLVM_TARGETS_TO_BUILD=" (system->llvm-target) ";AMDGPU") #$@(if (%current-target-system) '("-DBUILD_SHARED_LIBS:BOOL=TRUE" "-DCMAKE_BUILD_WITH_INSTALL_RPATH=TRUE") '()) ;; Skipping tools and utils decreases the output by ~100 MiB. "-DLLVM_BUILD_TOOLS=NO" (remove (cut string-match #$(if (%current-target-system) "-DLLVM_(LINK_LLVM_DYLIB|TARGETS_TO_BUILD|INSTALL_UTILS).*" "-DLLVM_(TARGETS_TO_BUILD|INSTALL_UTILS).*") <>) #$cf))) ((#:phases phases '%standard-phases) #~(modify-phases #$phases #$@(if (%current-target-system) '() #~((add-after 'install 'delete-static-libraries ;; If these are just relocated then llvm-config ;; can't find them. (lambda* (#:key outputs #:allow-other-keys) (for-each delete-file (find-files (string-append (assoc-ref outputs "out") "/lib") "\\.a$")))))) ;; llvm-config is how mesa and others find the various ;; libraries and headers they use. (add-after 'install 'build-and-install-llvm-config (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) (substitute* "tools/llvm-config/CMakeFiles/llvm-config.dir/link.txt" (((string-append (getcwd) "/build/lib")) (string-append out "/lib"))) (invoke "make" "llvm-config") (install-file "bin/llvm-config" (string-append out "/bin")))))))))))) (define make-ocaml-llvm ;; Make it a memoizing procedure so its callers below don't end up defining ;; two equal-but-not-eq "ocaml-llvm" packages for the default LLVM. (mlambdaq (llvm) (package (inherit llvm) (name "ocaml-llvm") (outputs '("out")) (arguments `(#:configure-flags (list (string-append "-DLLVM_OCAML_EXTERNAL_LLVM_LIBDIR=" (assoc-ref %build-inputs "llvm") "/lib") "-DBUILD_SHARED_LIBS=TRUE" "-DLLVM_OCAML_OUT_OF_TREE=TRUE" (string-append "-DLLVM_OCAML_INSTALL_PATH=" (assoc-ref %outputs "out") "/lib/ocaml/site-lib")) #:phases (modify-phases %standard-phases (replace 'build (lambda _ (invoke "make" "ocaml_all"))) (replace 'install (lambda _ (invoke "cmake" "-P" "bindings/ocaml/cmake_install.cmake")))))) (inputs (list llvm)) (native-inputs (list ocaml ocaml-findlib ocaml-ounit python)) (propagated-inputs (list ocaml-integers ocaml-ctypes)) (synopsis "OCaml bindings to LLVM") (description "This package contains the OCaml bindings distributed with LLVM.")))) (define-public ocaml-llvm (make-ocaml-llvm llvm)) (define-public ocaml-llvm-9 (make-ocaml-llvm llvm-9)) (define-public ocaml-llvm-10 (make-ocaml-llvm llvm-10)) (define-public ocaml-llvm-11 (make-ocaml-llvm llvm-11)) (define-public wllvm (package (name "wllvm") (version "1.3.1") (source (origin (method url-fetch) (uri (pypi-uri "wllvm" version)) (sha256 (base32 "0cf31hixzq5bzkxv91rvadlhrpxzy934134scv4frj85bxbpl19y")))) (build-system pyproject-build-system) (home-page "https://github.com/SRI-CSL/whole-program-llvm") (synopsis "Whole Program LLVM") (description "This package provides a toolkit for building whole-program LLVM bitcode files.") (license license:expat))) (define-public llvm-julia (package (inherit llvm-13) (arguments (substitute-keyword-arguments (package-arguments llvm-13) ((#:configure-flags flags ''()) #~(cons* "-DLLVM_BUILD_LLVM_DYLIB=ON" "-DLLVM_LINK_LLVM_DYLIB=ON" ;; "-DLLVM_EXPERIMENTAL_TARGETS_TO_BUILD=NVPTX" "-DLLVM_VERSION_SUFFIX:STRING=jl" ; Perhaps not needed. #$(string-append "-DLLVM_TARGETS_TO_BUILD=" (system->llvm-target)) (delete "-DBUILD_SHARED_LIBS:BOOL=TRUE" #$flags))) ((#:build-type _) "Release"))) (properties `((hidden? . #t) ,@(package-properties llvm-13))))) (define llvm-cling ;; To determine which version of LLVM a given release of Cling should use, ;; consult the ;; https://raw.githubusercontent.com/root-project/cling/master/LastKnownGoodLLVMSVNRevision.txt ;; file. (let ((base llvm-15)) ;for a DYLIB build (package/inherit base (name "llvm-cling") (version "13-20240318-01") (source (origin (inherit (package-source base)) (method git-fetch) (uri (git-reference (url "https://github.com/root-project/llvm-project") (commit (string-append "cling-llvm" version)))) (file-name (git-file-name "llvm-cling" version)) (sha256 (base32 "1zh6yp8px9hla7v9i67a6anbph140f8ixxbsz65aj7fizksjs1h3")) (patches (search-patches "clang-cling-13-libc-search-path.patch"))))))) (define clang-cling-runtime (let ((base clang-runtime-13)) (package/inherit base (name "clang-cling-runtime") (version (package-version llvm-cling)) (source (package-source llvm-cling)) (arguments (substitute-keyword-arguments (package-arguments base) ((#:phases phases '%standard-phases) #~(modify-phases #$phases (add-after 'unpack 'change-directory (lambda _ (chdir "compiler-rt"))) (add-after 'install 'delete-static-libraries ;; This reduces the size from 22 MiB to 4 MiB. (lambda _ (for-each delete-file (find-files #$output "\\.a$")))))))) (inputs (modify-inputs (package-inputs base) (replace "llvm" llvm-cling)))))) (define clang-cling (let ((base clang-13)) (package/inherit base (name "clang-cling") (version (package-version llvm-cling)) (source (package-source llvm-cling)) (arguments (substitute-keyword-arguments (package-arguments base) ((#:phases phases '%standard-phases) #~(modify-phases #$phases (add-after 'unpack 'change-directory (lambda _ (chdir "clang"))) (add-after 'install 'delete-static-libraries ;; This reduces the size by half, from 220 MiB to 112 MiB. (lambda _ (for-each delete-file (find-files #$output "\\.a$")))))))) (propagated-inputs (modify-inputs (package-propagated-inputs base) (replace "llvm" llvm-cling) (replace "clang-runtime" clang-cling-runtime)))))) (define-public cling (package (name "cling") (version "1.0") (source (origin (method git-fetch) (uri (git-reference (url "https://github.com/root-project/cling") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 (base32 "17n66wf5yg1xjc94d6yb8g2gydjz0b8cj4a2pn6xrygdvhh09vv1")) ;; Patch submitted upstream here: ;; https://github.com/root-project/cling/pull/433. (patches (search-patches "cling-use-shared-library.patch")))) (build-system cmake-build-system) (arguments (list #:build-type "Release" ;keep the build as lean as possible #:tests? #f ;FIXME: 78 tests fail (out of ~200) #:test-target "check-cling" #:configure-flags #~(list (string-append "-DCLING_CXX_PATH=" (search-input-file %build-inputs "bin/g++")) ;; XXX: The AddLLVM.cmake module expects LLVM_EXTERNAL_LIT to ;; be a Python script, not a shell executable. (string-append "-DLLVM_EXTERNAL_LIT=" (search-input-file %build-inputs "bin/.lit-real"))) #:phases #~(modify-phases %standard-phases (add-after 'unpack 'set-version (lambda _ (make-file-writable "VERSION") (call-with-output-file "VERSION" (lambda (port) (format port "~a~%" #$version))))) (add-after 'unpack 'patch-paths (lambda* (#:key inputs #:allow-other-keys) (substitute* "lib/Interpreter/CIFactory.cpp" (("\\bsed\\b") (which "sed")) ;; This ensures that the default C++ library used by Cling is ;; that of the compiler that was used to build it, rather ;; than that of whatever g++ happens to be on PATH. (("ReadCompilerIncludePaths\\(CLING_CXX_RLTV") (format #f "ReadCompilerIncludePaths(~s" (search-input-file inputs "bin/g++"))) ;; Cling uses libclang's CompilerInvocation::GetResourcesPath ;; to resolve Clang's library prefix, but this fails on Guix ;; because it is relative to the output of cling rather than ;; clang (see: ;; https://github.com/root-project/cling/issues/434). Fully ;; shortcut the logic in this method to return the correct ;; static location. (("static std::string getResourceDir.*" all) (string-append all " return std::string(\"" #$(this-package-input "clang-cling") "/lib/clang/" #$(first (take (string-split (package-version clang-cling) #\-) 1)) ".0.0" ;e.g. 13.0.0 "\");"))) ;; Check for the 'lit' command for the tests, not 'lit.py' ;; (see: https://github.com/root-project/cling/issues/432). (substitute* "CMakeLists.txt" (("lit.py") "lit")))) (add-after 'unpack 'adjust-lit.cfg ;; See: https://github.com/root-project/cling/issues/435. (lambda _ (substitute* "test/lit.cfg" (("config.llvm_tools_dir \\+ '") "config.cling_obj_root + '/bin")))) (add-after 'install 'delete-static-libraries ;; This reduces the size from 17 MiB to 5.4 MiB. (lambda _ (for-each delete-file (find-files #$output "\\.a$"))))))) (native-inputs (list python python-lit)) (inputs (list clang-cling llvm-cling libxcrypt)) (home-page "https://root.cern/cling/") (synopsis "Interactive C++ interpreter") (description "Cling is an interactive C++17 standard compliant interpreter, built on top of LLVM and Clang. Cling can be used as a read-eval-print loop (REPL) to assist with rapid application development. Here's how to print @samp{\"Hello World!\"} using @command{cling}: @example cling '#include <stdio.h>' 'printf(\"Hello World!\\n\");' @end example") (license license:lgpl2.1+))) ;for the combined work
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