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authorNavid Afkhami <navid.afkhami@mdc-berlin.de>2023-03-03 13:07:22 +0000
committerRicardo Wurmus <rekado@elephly.net>2023-03-03 15:11:43 +0100
commit03ef0914d5cb561ab1e0091c88457e6538b0231f (patch)
tree62dec1b33239dd33f70153aa87cf4e9018b0b0fd /gnu/packages
parent9aad3dfd7b33fc705bd31875c0b855957b90a677 (diff)
downloadguix-03ef0914d5cb561ab1e0091c88457e6538b0231f.tar.gz
guix-03ef0914d5cb561ab1e0091c88457e6538b0231f.zip
gnu: Add r-hgnchelper.
* gnu/packages/cran.scm (r-hgnchelper): New variable.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/cran.scm24
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 16314b33d7..8f058c5906 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -3052,6 +3052,30 @@ model fitting and error handling.")
into a pipeline of data manipulation and visualisation.")
(license license:gpl3)))
+(define-public r-hgnchelper
+ (package
+ (name "r-hgnchelper")
+ (version "0.8.1")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "HGNChelper" version))
+ (sha256
+ (base32
+ "0qwkk5658j4j6w2wgvxkp38cyvscjp93d3zc7gb97vcihqx0ngxa"))))
+ (properties `((upstream-name . "HGNChelper")))
+ (build-system r-build-system)
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/waldronlab/HGNChelper")
+ (synopsis
+ "Identification and correction of invalid gene symbols for human and mouse")
+ (description
+ "This package provides a set of R functions for identifying and
+correcting HGNC human gene symbols. In addition, you can identify MGI mouse
+gene symbols, which have been converted to date format by Excel, withdrawn, or
+aliased. It also contains functions for reversibly converting between HGNC
+symbols and valid R names.")
+ (license license:gpl2+)))
+
(define-public r-hmm
(package
(name "r-hmm")