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authorzimoun <zimon.toutoune@gmail.com>2021-03-08 18:57:59 +0100
committerRicardo Wurmus <rekado@elephly.net>2021-03-12 14:45:54 +0100
commit031fdda47af642d4316e128f9ca0c3fe2cf8b4bb (patch)
treea9f1aad7591d5812805d7bb8d43fc98eacd4f33d /gnu/packages/pumpio.scm
parentf44079bc2151979cde33704fec73f1da1726a2f5 (diff)
downloadguix-031fdda47af642d4316e128f9ca0c3fe2cf8b4bb.tar.gz
guix-031fdda47af642d4316e128f9ca0c3fe2cf8b4bb.zip
gnu: r-gseabase: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-gseabase): Move from here... * gnu/packages/bioconductor.scm (r-gseabase): ...to here.
Diffstat (limited to 'gnu/packages/pumpio.scm')
0 files changed, 0 insertions, 0 deletions
-up of 61a1165340a8bcc45550259edca25275d899fe09. For packages provided by external channels, package-channels procedure will return at least two channels. Take it into account. * gnu/ci.scm (cuirass-jobs): Fix channels subset argument. Mathieu Othacehe 2021-03-14ci: Add channel subset support....* gnu/ci.scm (cuirass-jobs): Add channel subset support. Mathieu Othacehe 2021-03-10ci: Remove hydra support....This removes hydra support to use Cuirass as the only continuous integration system. * build-aux/hydra/gnu-system.scm: Remove it. * build-aux/hydra/guix-modular.scm: Ditto. * build-aux/hydra/guix.scm: Ditto. * build-aux/cuirass/hydra-to-cuirass.scm: Ditto. * Makefile.am (EXTRA_DIST): Update it. (hydra-jobs.scm): Remove it. (cuirass-jobs.scm): Update it. * build-aux/hydra/evaluate.scm: Move it to ... * build-aux/cuirass/evaluate.scm: ... here. * build-aux/cuirass/guix-modular.scm: Remove it. * build-aux/cuirass/gnu-system.scm: Ditto. * guix/packages.scm (%hydra-supported-systems): Rename it to ... (%cuirass-supported-systems): ... this variable. * build-aux/check-final-inputs-self-contained: Adapt it. * etc/release-manifest.scm: Ditto. * gnu/ci.scm (package->alist): Remove it. (derivation->job): New procedure. (package-job, package-cross-job, cross-jobs, image-jobs, system-test-jobs, tarball-jobs): Use it. (guix-jobs): New procedure. (hydra-jobs): Rename it to ... (cuirass-jobs): ... this procedure. Mathieu Othacehe 2021-01-31ci: Remove the package version from the job name....Match Hydra behaviour where the job_name is <package_name>.<system>. This allows to operate on several builds of the same package in the CI, regardless of their version. * gnu/ci.scm (job-name): Remove package version from the job name. Mathieu Othacehe 2021-01-29ci: Raise max-silent-time to 3600....* gnu/ci.scm (image-jobs, system-test-jobs): Raise max-silent-time to 3600 seconds. Mathieu Othacehe 2020-12-03ci: Build novena-barebones-raw-image....* gnu/ci.scm (%guix-system-images): Add novena-barebones-raw-image. Danny Milosavljevic 2020-12-01Revert "ci: Temporarily disable image-jobs."...This reverts commit a79041f0b583ef3399bb46ac2a6c03a4db636573. The issue has been fixed with 07a33b1d21e240781072352f93206cfdc765f907. Mathieu Othacehe 2020-11-29ci: Temporarily disable image-jobs....* gnu/ci.scm (hydra-jobs): Temporarily disable image-jobs. Mathieu Othacehe 2020-11-25ci: Limit image and system tests jobs periodicity....System tests and images jobs are extremely expensive in I/O operations and storage size, pass a "period" argument to Cuirass to limit their periodicity. * gnu/ci.scm (hours): New procedure, (image-jobs, system-test-jobs, tarball-jobs): set a period argument. Mathieu Othacehe 2020-11-20image: Add pinebook-pro support....* gnu/system/images/pinebook-pro.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/ci.scm (%guix-system-images): Add pinebook-pro-barebones-raw-image. Mathieu Othacehe 2020-11-02ci: Restore license handling....This is a follow-up of 7c02eb6c and 44daec7f. Restore the initial behaviour. * gnu/ci.scm (package->alist): Restore license handling. Mathieu Othacehe 2020-11-02ci: Convert license to text....This is a follow-up of 7c02eb6c8d7d050ecb8f3082c4a754ad32211403. * gnu/ci.scm (package->alist): Convert license to text. Mathieu Othacehe 2020-11-02ci: Ignore package license....Fixes: <https://issues.guix.gnu.org/44370>. * gnu/ci.scm (package->alist): Ignore package license. Mathieu Othacehe 2020-10-06images: Add pine64-barebones-raw-image....* gnu/system/images/pine64.scm (pine64-barebones-raw-image): New variable. * gnu/ci.scm (%guix-system-images): Add it. Mathieu Othacehe 2020-10-01ci: Add log and outputs keys....Add 'log and 'outputs properties to hydra objects. This way Cuirass won't have to go through every derivation to add those properties. * gnu/ci.scm (package->alist, image-jobs, system-test-jobs, tarball-jobs): Add 'log and 'outputs properties. * build-aux/hydra/guix-modular.scm (build-job): Ditto. Mathieu Othacehe 2020-10-01ci: Add nix-name and system keys....Add 'nix-name and 'system properties to hydra objects. This way Cuirass won't have to go through every derivation to add those properties. * gnu/ci.scm (package->alist, image-jobs, system-test-jobs, tarball-jobs): Add 'nix-name and 'system properties. * build-aux/hydra/guix-modular.scm (build-job): Ditto. Mathieu Othacehe 2020-09-29ci: Build hurd-barebones-qcow2-image....Build hurd-barebones-qcow2-image instead of hurd-barebones-disk-image to speed downloads. * gnu/ci.scm (%guix-system-images): Build 'hurd-barebones-qcow2-image instead of 'hurd-barebones-disk-image. Mathieu Othacehe 2020-09-25ci: Remove native-system restriction from "hello" and "list" jobsets....* gnu/ci.scm (hydra-jobs): Remove restriction for system to equal (%current-system). Co-authored-by: Ludovic Courtès <ludo@gnu.org> Jan (janneke) Nieuwenhuizen 2020-09-03ci: In the 'core' subset, build GCC >= 7....Suggested by Jan Nieuwenhuizen <janneke@gnu.org>. * gnu/ci.scm (%core-packages): Keep only GCC >= 7. Ludovic Courtès 2020-09-03gnu: ci: Truncate git commit in ISO label....* gnu/ci.scm (image-jobs): Keep only 7 characters from git commit in ISO label. Julien Lepiller 2020-08-31gnu: ci: Set label in iso9660 jobs....* gnu/ci.scm (image-jobs): Set label of generated ISOs. Julien Lepiller 2020-06-29ci: Do not limit disk-image size....Installation tests are already checking the disk-image size. Do not set another limit here. * gnu/ci.scm (image-jobs): Do not limit disk-image size. Mathieu Othacehe 2020-06-25ci: Build Guix System images....Build a list of Guix System images. For now, this list only contains the Hurd barebones Guix System image. * gnu/ci.scm (%guixsd-supported-systems): Remove "armhf-linux", (%u-boot-systems): remove unused variable, (%guix-system-images): new variable (qemu-jobs): rename to "image-jobs" and build the Guix Systems listed in the new "%guix-system-images" variable, (system-test-jobs): adapt accordingly, (hydra-jobs): ditto. Mathieu Othacehe 2020-06-25Revert "ci: Build Guix System images."...This reverts commit eda3fcfb46586710fff876ce6254b300795ef543. This change broke evaluations on CI: @ build-succeeded /gnu/store/991738x97ff1f8181a7p1pflqwkgagm8-profile.drv - ERROR: In procedure read: In procedure scm_lreadr: #<unknown port>:16:144: Unknown # object: #\< Ludovic Courtès 2020-06-24ci: Build Guix System images.Mathieu Othacehe