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author | Pierre Langlois <pierre.langlois@gmx.com> | 2020-06-18 00:59:09 +0200 |
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committer | Ludovic Courtès <ludo@gnu.org> | 2020-06-22 15:44:16 +0200 |
commit | 6e31d6f3c478144de1ad185dc7341d5513f464c0 (patch) | |
tree | 5570f90197142b9027a4c6b3a8c2e30b5d6e3730 /gnu/packages/graph.scm | |
parent | 3417a25156946d5cf69dafa283664a09067d9645 (diff) | |
download | guix-6e31d6f3c478144de1ad185dc7341d5513f464c0.tar.gz guix-6e31d6f3c478144de1ad185dc7341d5513f464c0.zip |
gnu: python-plotly: Update to 4.8.1.
But keep version 2.4.1 around for packages that still need it and for python2
support.
* gnu/packages/graph.scm (python-plotly): Update to 4.8.1.
[source]: Use git-fetch so that tests are also included.
[arguments]: Enable tests.
[home-page]: Follow redirect.
(python-plotly-2.4.1): New variable.
(python2-plotly): Inherit from python-plotly-2.4.1.
* gnu/packages/bioinformatics.scm (python-deeptools)[native-inputs]: Depend on
python-plotly-2.4.1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Diffstat (limited to 'gnu/packages/graph.scm')
-rw-r--r-- | gnu/packages/graph.scm | 74 |
1 files changed, 60 insertions, 14 deletions
diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm index dc8f2c64a2..762ee30632 100644 --- a/gnu/packages/graph.scm +++ b/gnu/packages/graph.scm @@ -5,6 +5,7 @@ ;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2019 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2020 Alexander Krotov <krotov@iitp.ru> +;;; Copyright © 2020 Pierre Langlois <pierre.langlos@gmx.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -235,25 +236,49 @@ lines.") (define-public python-plotly (package (name "python-plotly") - (version "2.4.1") - (source - (origin - (method url-fetch) - (uri (pypi-uri "plotly" version)) - (sha256 - (base32 - "0s9gk2fl53x8wwncs3fwii1vzfngr0sskv15v3mpshqmrqfrk27m")))) + (version "4.8.1") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/plotly/plotly.py.git") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "08ab677gr85m10zhixr6dnmlfws8q6sra7nhyb8nf3r8dx1ffqhz")))) (build-system python-build-system) (arguments - '(#:tests? #f)) ; The tests are not distributed in the release + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'chdir + (lambda _ + (chdir "packages/python/plotly") + #t)) + (replace 'check + (lambda _ + (invoke "pytest" "-x" "plotly/tests/test_core") + (invoke "pytest" "-x" "plotly/tests/test_io") + ;; FIXME: Add optional dependencies and enable their tests. + ;; (invoke "pytest" "-x" "plotly/tests/test_optional") + (invoke "pytest" "_plotly_utils/tests"))) + (add-before 'reset-gzip-timestamps 'make-files-writable + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (for-each (lambda (file) (chmod file #o644)) + (find-files out "\\.gz")) + #t)))))) + (native-inputs + `(("python-pytest" ,python-pytest))) (propagated-inputs `(("python-decorator" ,python-decorator) - ("python-nbformat" ,python-nbformat) + ("python-ipywidgets" ,python-ipywidgets) ("python-pandas" ,python-pandas) - ("python-pytz" ,python-pytz) ("python-requests" ,python-requests) - ("python-six" ,python-six))) - (home-page "https://plot.ly/python/") + ("python-retrying" ,python-retrying) + ("python-six" ,python-six) + ("python-statsmodels" ,python-statsmodels) + ("python-xarray" ,python-xarray))) + (home-page "https://plotly.com/python/") (synopsis "Interactive plotting library for Python") (description "Plotly's Python graphing library makes interactive, publication-quality graphs online. Examples of how to make line plots, scatter @@ -261,8 +286,29 @@ plots, area charts, bar charts, error bars, box plots, histograms, heatmaps, subplots, multiple-axes, polar charts, and bubble charts. ") (license license:expat))) +(define-public python-plotly-2.4.1 + (package (inherit python-plotly) + (version "2.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "plotly" version)) + (sha256 + (base32 + "0s9gk2fl53x8wwncs3fwii1vzfngr0sskv15v3mpshqmrqfrk27m")))) + (native-inputs '()) + (propagated-inputs + `(("python-decorator" ,python-decorator) + ("python-nbformat" ,python-nbformat) + ("python-pandas" ,python-pandas) + ("python-pytz" ,python-pytz) + ("python-requests" ,python-requests) + ("python-six" ,python-six))) + (arguments + '(#:tests? #f)))) ; The tests are not distributed in the release + (define-public python2-plotly - (package-with-python2 python-plotly)) + (package-with-python2 python-plotly-2.4.1)) (define-public python-louvain (package |