gnu: r-minfi: Disable tests. - guix - Wojtek's customized Guix

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author	Ricardo Wurmus <rekado@elephly.net>	2024-11-27 09:24:48 +0100
committer	Ricardo Wurmus <rekado@elephly.net>	2024-12-03 16:59:52 +0100
commit	142a2953a36c3e2c1f0298027f99c9b08801d7eb (patch)
tree	8618a7bc49af802d387de7929dfc3b167945ef7b /gnu/packages/dbm.scm
parent	387ca84d52b4fb8ceefb0d8c46696017725a12c5 (diff)
download	guix-142a2953a36c3e2c1f0298027f99c9b08801d7eb.tar.gz guix-142a2953a36c3e2c1f0298027f99c9b08801d7eb.zip

gnu: r-minfi: Disable tests.

* gnu/packages/bioconductor.scm (r-minfi)[arguments]: Disable tests. Change-Id: I6fdb8d78c176c2ebbfbd9289a00833b79448c7a2

Diffstat (limited to 'gnu/packages/dbm.scm')

0 files changed, 0 insertions, 0 deletions

='#n108'>108 109 110 111 112

;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2016-2018, 2020, 2022 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2017 Jan Nieuwenhuizen <janneke@gnu.org>
;;; Copyright © 2021 Mathieu Othacehe <othacehe@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.

;;; This program replicates the behavior of Cuirass's 'evaluate' process.
;;; It displays the evaluated jobs on the standard output.

(use-modules (guix channels)
             (guix derivations)
             (guix git-download)
             (guix inferior)
             (guix packages)
             (guix store)
             (guix ui)
             ((guix ui) #:select (build-notifier))
             (ice-9 match)
             (ice-9 threads))

(define %top-srcdir
  (and=> (assq-ref (current-source-location) 'filename)
         (lambda (file)
           (canonicalize-path
            (string-append (dirname file) "/../..")))))

(match (command-line)
  ((command directory)
   (let ((real-build-things build-things))
     (with-store store
       ;; Make sure we don't resort to substitutes.
       (set-build-options store
                          #:use-substitutes? #f
                          #:substitute-urls '())

       ;; The evaluation of Guix itself requires building a "trampoline"
       ;; program, and possibly everything it depends on.  Thus, allow builds
       ;; but print a notification.
       (with-build-handler (build-notifier #:use-substitutes? #f)

         ;; Add %TOP-SRCDIR to the store with a proper Git predicate so we
         ;; work from a clean checkout.
         (let ((source (add-to-store store "guix-source" #t
                                     "sha256" %top-srcdir
                                     #:select? (git-predicate %top-srcdir))))
           (define instances
             (list (checkout->channel-instance source)))

           (define channels
             (map channel-instance-channel instances))

           (define derivation
             ;; Compute the derivation of Guix for COMMIT.
             (run-with-store store
               (channel-instances->derivation instances)))

           ;; TODO: Remove 'show-what-to-build' call when Cuirass' 'evaluate'
           ;; scripts uses 'with-build-handler'.
           (show-what-to-build store (list derivation))
           (build-derivations store (list derivation))


           ;; Evaluate jobs on a per-system basis for two reasons.  It speeds
           ;; up the evaluation speed as the evaluations can be performed
           ;; concurrently.  It also decreases the amount of memory needed per
           ;; evaluation process.
           ;;
           ;; Fork inferior processes upfront before we have created any
           ;; threads.
           (let ((inferiors (map (lambda _
                                   (open-inferior (derivation->output-path derivation)))
                                 %cuirass-supported-systems)))
             (n-par-for-each
              (min (length %cuirass-supported-systems)
                   (current-processor-count))
              (lambda (system inferior)
                (with-store store
                  (let ((channels (map channel-instance->sexp instances)))
                    (inferior-eval '(use-modules (gnu ci)) inferior)
                    (let ((jobs
                           (inferior-eval-with-store
                            inferior store
                            `(lambda (store)
                               (cuirass-jobs store
                                             '((subset . all)
                                               (systems . ,(list system))
                                               (channels . ,channels))))))
                          (file
                           (string-append directory "/jobs-" system ".scm")))
                      (close-inferior inferior)
                      (call-with-output-file file
                        (lambda (port)
                          (write jobs port)))))))
              %cuirass-supported-systems
              inferiors)))))))
  (x
   (format (current-error-port) "Wrong command: ~a~%." x)
   (exit 1)))

em, create-fat32-file-system, create-jfs-file-system, create-ntfs-file-system, create-xfs-file-system, create-swap-partition, luks-format-and-open, luks-close): Use run-command-in-installer. (with-null-output-ports): Remove. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Josselin Poiret 2022-02-02installer: Add installer-specific run command process....Josselin Poiret 2022-02-02installer: Capture external commands output....Josselin Poiret 2022-02-02installer: Remove specific logging code....Josselin Poiret 2022-02-02installer: Keep PATH inside the install container....Josselin Poiret 2022-02-02installer: Un-export syslog syntax....Josselin Poiret 2022-02-02installer: Use new installer-log-line everywhere....Josselin Poiret 2022-02-02installer: Generalize logging facility....Josselin Poiret 2022-02-02installer: Add crash dump upload support....Mathieu Othacehe 2022-01-14installer: Install the locale before mounting the cow-store....Mathieu Othacehe 2022-01-14installer: Do not set the locale in run-command....Mathieu Othacehe 2022-01-14installer: Remove an unused procedure....Mathieu Othacehe 2022-01-14installer: Check if ci.guix.gnu.org can be reached....Mathieu Othacehe 2022-01-14installer: Ignore small devices....Mathieu Othacehe 2021-12-28installer: Offer 'gpm-service-type' for non-graphical systems....Leo Famulari 2021-12-28installer: Recommend 'ntp-service-type' for non-graphical systems....Leo Famulari 2021-12-28installer: Offer the CUPS printing service on a dedicated page....Leo Famulari


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