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author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2023-02-27 11:28:42 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2023-03-01 12:38:52 +0100 |
commit | e59eb3fe63a5b0b73592c7c07f85dae90d785de0 (patch) | |
tree | fa242684f35135c091e98bd98c9591ded73993dd /gnu/packages/cran.scm | |
parent | 7018092b0ea588ad04d0ae549c256dd9a480866b (diff) | |
download | guix-e59eb3fe63a5b0b73592c7c07f85dae90d785de0.tar.gz guix-e59eb3fe63a5b0b73592c7c07f85dae90d785de0.zip |
gnu: Add r-leidenalg.
* gnu/packages/cran.scm (r-leidenalg): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/cran.scm')
-rw-r--r-- | gnu/packages/cran.scm | 35 |
1 files changed, 35 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ceb84ba823..a1da9d229e 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -23348,6 +23348,41 @@ graph into communities. See also Traag et al (2018) \"From Louvain to Leiden: guaranteeing well-connected communities.\" <arXiv:1810.08473>.") (license license:gpl3))) +(define-public r-leidenalg + (package + (name "r-leidenalg") + (version "1.0.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "leidenAlg" version)) + (sha256 + (base32 "1z96zrsms93gspylmficaggb0xj94kq9rg3p2svdbb451jbga9an")))) + (properties `((upstream-name . "leidenAlg"))) + (build-system r-build-system) + (inputs + (list glpk gmp libxml2)) + (propagated-inputs + (list r-igraph + r-matrix + r-rcpp + r-rcpparmadillo + r-rcppeigen + r-sccore)) + (native-inputs (list gfortran)) + (home-page "https://github.com/kharchenkolab/leidenAlg") + (synopsis "Leiden algorithm via an R interface") + (description + "This package implements an R interface to the Leiden algorithm, an +iterative community detection algorithm on networks. The algorithm is +designed to converge to a partition in which all subsets of all communities +are locally optimally assigned, yielding communities guaranteed to be +connected. The implementation proves to be fast, scales well, and can be run +on graphs of millions of nodes (as long as they can fit in memory).") + ;; The DESCRIPTION file says GPL-3, but the code was copied from + ;; https://github.com/vtraag/leidenalg, which is under GPLv3+. + (license license:gpl3+))) + (define-public r-patchwork (package (name "r-patchwork") |