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| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2018-09-24 13:23:32 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-09-24 13:31:20 +0200 |
| commit | a434730f2ebc39fcda7a8d0709c7f5adffa69299 (patch) | |
| tree | b9c678b363b99c63e27f87e0b32be827793417c1 /gnu/packages/bioinformatics.scm | |
| parent | 5c8031ff7382ec9079040d08ae5a05b4dd2352b7 (diff) | |
| download | guix-a434730f2ebc39fcda7a8d0709c7f5adffa69299.tar.gz guix-a434730f2ebc39fcda7a8d0709c7f5adffa69299.zip | |
gnu: Add r-xbioc.
* gnu/packages/bioinformatics.scm (r-xbioc): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b619866ba3..d92fbd7de9 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -13760,3 +13760,36 @@ sequencing data.") ;; This is free software but the license variant is unclear: ;; <https://github.com/mw55309/poRe_docs/issues/10>. (license license:bsd-3))) + +(define-public r-xbioc + (let ((revision "1") + (commit "f798c187e376fd1ba27abd559f47bbae7e3e466b")) + (package + (name "r-xbioc") + (version (git-version "0.1.15" revision commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/renozao/xbioc.git") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "03hffh2f6z71y6l6dqpa5cql3hdaw7zigdi8sm2dzgx379k9rgrr")))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationdbi" ,r-annotationdbi) + ("r-assertthat" ,r-assertthat) + ("r-biobase" ,r-biobase) + ("r-biocinstaller" ,r-biocinstaller) + ("r-digest" ,r-digest) + ("r-pkgmaker" ,r-pkgmaker) + ("r-plyr" ,r-plyr) + ("r-reshape2" ,r-reshape2) + ("r-stringr" ,r-stringr))) + (home-page "https://github.com/renozao/xbioc/") + (synopsis "Extra base functions for Bioconductor") + (description "This package provides extra utility functions to perform +common tasks in the analysis of omics data, leveraging and enhancing features +provided by Bioconductor packages.") + (license license:gpl3+)))) |