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author | Ricardo Wurmus <rekado@elephly.net> | 2023-02-10 12:10:42 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2023-02-10 15:48:51 +0100 |
commit | 769346eef7e4d712cabb84179a62e877b9a69292 (patch) | |
tree | 69c751ede96e3f2f11e14c38d10b2f40f42d50b7 /gnu/packages/bioinformatics.scm | |
parent | 3b9892ad07a943ff17f72377f6ca344041237979 (diff) | |
download | guix-769346eef7e4d712cabb84179a62e877b9a69292.tar.gz guix-769346eef7e4d712cabb84179a62e877b9a69292.zip |
gnu: Add louvain.
* gnu/packages/bioinformatics.scm (louvain): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r-- | gnu/packages/bioinformatics.scm | 34 |
1 files changed, 34 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index fdf52c5851..7ea856c157 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -16839,6 +16839,40 @@ sequencing (e.g. mapping or base/indel alignment uncertainty), which are usually ignored by other methods or only used for filtering.") (license license:expat))) +(define-public louvain + (package + (name "louvain") + (version "0.2") + (source (origin + (method url-fetch) + (uri "mirror://sourceforge/louvain/louvain_latest.tar.gz") + (sha256 + (base32 + "0hqlv5jqc889nbv7j1bchrx4zhh69hgr2mqvfdygc7kwrywn22lb")))) + (build-system gnu-build-system) + (arguments + (list + #:tests? #false ;there are none + #:phases + #~(modify-phases %standard-phases + (delete 'configure) + (add-after 'unpack 'patch-includes + (lambda _ + (substitute* "main_community.cpp" + (("using namespace std;" m) + (string-append "#include <unistd.h> /* for getpid */\n" m))))) + (replace 'install + (lambda _ + (for-each + (lambda (exe) + (install-file exe (string-append #$output "/bin"))) + '("convert" "community" "hierarchy"))))))) + (home-page "https://sourceforge.net/projects/louvain/") + (synopsis "Multi-criteria community detection") + (description "This package offers a set of functions to use in order to +compute communities on graphs weighted or unweighted.") + (license license:gpl3+))) + (define-public ivar (package (name "ivar") |