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author | Roel Janssen <roel@gnu.org> | 2020-09-10 16:38:43 +0200 |
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committer | Roel Janssen <roel@gnu.org> | 2020-09-10 16:38:43 +0200 |
commit | 66be746dc0c0f4ba3d748ed8d0983b2f9afdace8 (patch) | |
tree | 9ca34a49357a0cd5bc4a1ac65fe258a3d976631f /gnu/packages/bioinformatics.scm | |
parent | a5c151de0a7a75bf3803c51856f8c8c928361155 (diff) | |
download | guix-66be746dc0c0f4ba3d748ed8d0983b2f9afdace8.tar.gz guix-66be746dc0c0f4ba3d748ed8d0983b2f9afdace8.zip |
gnu: Move r-bisquerna.
* gnu/packages/bioinformatics.scm (r-bisquerna): Move to ...
* gnu/packages/cran.scm: ... here.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r-- | gnu/packages/bioinformatics.scm | 25 |
1 files changed, 0 insertions, 25 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 96cc71babc..cab3df222c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -7897,31 +7897,6 @@ manipulating genomic intervals and variables defined along a genome.") on Bioconductor or which replace R functions.") (license license:artistic2.0))) -(define-public r-bisquerna - (package - (name "r-bisquerna") - (version "1.0.4") - (source (origin - (method url-fetch) - (uri (cran-uri "BisqueRNA" version)) - (sha256 - (base32 - "01g34n87ml7n3pck77497ddgbv3rr5p4153ac8ninpgjijlm3jw2")))) - (properties `((upstream-name . "BisqueRNA"))) - (build-system r-build-system) - (propagated-inputs - `(("r-biobase" ,r-biobase) - ("r-limsolve" ,r-limsolve))) - (home-page "https://www.biorxiv.org/content/10.1101/669911v1") - (synopsis "Decomposition of Bulk Expression with Single-Cell Sequencing") - (description "This package provides tools to accurately estimate cell type -abundances from heterogeneous bulk expression. A reference-based method -utilizes single-cell information to generate a signature matrix and -transformation of bulk expression for accurate regression based estimates. -A marker-based method utilizes known cell-specific marker genes to measure -relative abundances across samples.") - (license license:gpl3))) - (define-public r-annotationdbi (package (name "r-annotationdbi") |