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| author | Ricardo Wurmus <rekado@elephly.net> | 2023-06-01 14:57:13 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-06-01 20:48:17 +0200 |
| commit | 525ef60ff43f682ff22dc6c7d23d095225287022 (patch) | |
| tree | f6d95a925f09a06cba48965cef2cdd437e53e3b3 /gnu/packages/bioinformatics.scm | |
| parent | cf388642ce1af18aa1711ad2e79e850bf469e520 (diff) | |
| download | guix-525ef60ff43f682ff22dc6c7d23d095225287022.tar.gz guix-525ef60ff43f682ff22dc6c7d23d095225287022.zip | |
gnu: Add python-illumina-utils.
* gnu/packages/bioinformatics.scm (python-illumina-utils): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b3b10af193..34d4a2e08c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -4639,6 +4639,26 @@ analysis tool Scanpy (Genome Biology, 2018).") exploration.") (license license:gpl3+))) +(define-public python-illumina-utils + (package + (name "python-illumina-utils") + (version "2.12") + (source (origin + (method url-fetch) + (uri (pypi-uri "illumina-utils" version)) + (sha256 + (base32 + "0z9g0prj7pmgl5z4vdpxv3v30grzhc194801qnf0wqzgy7w3aj2s")))) + (build-system pyproject-build-system) + (arguments (list #:tests? #false)) ;there are none + (propagated-inputs (list python-matplotlib python-numpy python-levenshtein)) + (home-page "https://github.com/meren/illumina-utils") + (synopsis "Library and scripts to work with Illumina paired-end data") + (description + "This package provides a library and collection of scripts to work with +Illumina paired-end data (for CASAVA 1.8+).") + (license license:gpl2+))) + (define-public exonerate (package (name "exonerate") |