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| author | Ludovic Courtès <ludo@gnu.org> | 2021-05-15 22:55:24 +0200 |
|---|---|---|
| committer | Ludovic Courtès <ludo@gnu.org> | 2021-05-15 22:55:24 +0200 |
| commit | 25487c3fe6a41dd62f6e53f256392224a3be2a08 (patch) | |
| tree | 1051a1716d962ba0a7bbbf9dc8f7b67aa2674400 /gnu/packages/bioinformatics.scm | |
| parent | 4a9597e4516ec5ca58df3e007fcd5ef1d3fd2e54 (diff) | |
| parent | 46eac03e720e9b21d225e2ec1c41299c09202d18 (diff) | |
| download | guix-25487c3fe6a41dd62f6e53f256392224a3be2a08.tar.gz guix-25487c3fe6a41dd62f6e53f256392224a3be2a08.zip | |
Merge branch 'master' into core-updates
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 8 |
1 files changed, 6 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 0d09a98dc5..36a7038b82 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -7554,14 +7554,18 @@ experience substantial biological insertions and deletions.") (replace 'install (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) - (bin (string-append out "/bin"))) + (bin (string-append out "/bin")) + (scripts (find-files "." "prinseq.*.pl"))) + (substitute* scripts + (("\"perl -pe") + (string-append "\"" (which "perl") " -pe"))) (for-each (lambda (file) (chmod file #o555) (install-file file bin) (wrap-script (string-append bin "/" (basename file)) `("PERL5LIB" ":" prefix (,(getenv "PERL5LIB"))))) - (find-files "." "prinseq.*.pl")))))))) + scripts))))))) (inputs `(("guile" ,guile-3.0) ; for wrapper scripts ("perl" ,perl) |