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| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2021-02-11 22:03:29 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-02-11 22:29:37 +0100 |
| commit | 160e4a95e7ef0880939afca7d0af4c9b5596bc6b (patch) | |
| tree | f4948fcba23e17f6d64f70d3f53d84646b0327c4 /gnu/packages/bioinformatics.scm | |
| parent | 175bea0ca42dba3e02109820efae0cac2804e73b (diff) | |
| download | guix-160e4a95e7ef0880939afca7d0af4c9b5596bc6b.tar.gz guix-160e4a95e7ef0880939afca7d0af4c9b5596bc6b.zip | |
gnu: bowtie1: Update to 1.3.0.
* gnu/packages/bioinformatics.scm (bowtie1): Update to 1.3.0.
[arguments]: Set CC in make flags.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 1a0e72ac4a..6f835b3875 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1654,14 +1654,14 @@ gapped, local, and paired-end alignment modes.") (define-public bowtie1 (package (name "bowtie1") - (version "1.2.3") + (version "1.3.0") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/bowtie-bio/bowtie/" - version "/bowtie-src-x86_64.zip")) + version "/bowtie-" version "-src.zip")) (sha256 (base32 - "0vmiqdhc9dzyfy9sh6vgi7k9xy2hiw8g87vbamnc6cgpm179zsa4")) + "11dbihdnrizc6qhx9xsw77w3q5ssx642alaqzvhxx32ak9glvq04")) (modules '((guix build utils))) (snippet '(substitute* "Makefile" @@ -1672,7 +1672,7 @@ gapped, local, and paired-end alignment modes.") (arguments '(#:tests? #f ; no "check" target #:make-flags - (list "all" + (list "CC=gcc" "all" (string-append "prefix=" (assoc-ref %outputs "out"))) #:phases (modify-phases %standard-phases |