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authorRicardo Wurmus <rekado@elephly.net>2024-11-29 21:43:56 +0100
committerRicardo Wurmus <rekado@elephly.net>2024-12-03 16:59:59 +0100
commitee883010538bad4846c7f68312e1a220d6219970 (patch)
tree17ba850e6356b150d6851891529b3bae05ff77dd /gnu/packages/bioconductor.scm
parent4b0c4607196c7d5f8a52005e8e48aff544311179 (diff)
downloadguix-ee883010538bad4846c7f68312e1a220d6219970.tar.gz
guix-ee883010538bad4846c7f68312e1a220d6219970.zip
gnu: Remove r-bioconcotk.
This package has been removed from Bioconductor and tests depend on a package that has also been removed. * gnu/packages/bioconductor.scm (r-bioconcotk): Remove variable. Change-Id: If444fb7a10aea71a5339b4a488683148c84bb236
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm46
1 files changed, 0 insertions, 46 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index f32eae19ff..3973bf21a5 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -23018,52 +23018,6 @@ classes for individual assays, and allowing subsetting by genomic ranges or
rownames.")
(license license:artistic2.0)))
-(define-public r-bioconcotk
- (package
- (name "r-bioconcotk")
- (version "1.24.0")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "BiocOncoTK" version))
- (sha256
- (base32
- "0h4cr7lrmbyx7kdj81s7ff75svr01rvzn54svqi93vjilawmpbm3"))))
- (properties `((upstream-name . "BiocOncoTK")))
- (build-system r-build-system)
- (propagated-inputs
- (list r-bigrquery
- r-car
- r-complexheatmap
- r-curatedtcgadata
- r-dbi
- r-dplyr
- r-dt
- r-genomicfeatures
- r-genomicranges
- r-ggplot2
- r-ggpubr
- r-graph
- r-httr
- r-iranges
- r-magrittr
- r-mass
- r-plyr
- r-rgraphviz
- r-rjson
- r-s4vectors
- r-scales
- r-shiny
- r-summarizedexperiment))
- (native-inputs
- (list r-knitr))
- (home-page "https://bioconductor.org/packages/BiocOncoTK")
- (synopsis "Bioconductor components for general cancer genomics")
- (description
- "The purpose of this package is to provide a central interface to various
-tools for genome-scale analysis of cancer studies.")
- (license license:artistic2.0)))
-
(define-public r-biocor
(package
(name "r-biocor")