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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-12-01 08:44:31 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-12-03 17:00:00 +0100 |
| commit | dedc157d71067c47535f97d19de1deeee03bcd0e (patch) | |
| tree | 0eda31b4aadd89d0b6500d0e2a6e0da3adaddd7b /gnu/packages/bioconductor.scm | |
| parent | f8bbfe1ea962460204864e300c4b33afa15c1d44 (diff) | |
| download | guix-dedc157d71067c47535f97d19de1deeee03bcd0e.tar.gz guix-dedc157d71067c47535f97d19de1deeee03bcd0e.zip | |
gnu: r-reportingtools: Add missing inputs.
* gnu/packages/bioconductor.scm (r-reportingtools)[native-inputs]: Add
r-all, r-genefilter, r-hgu95av2-db, r-org-hs-eg-db, r-org-mm-eg-db,
r-org-sc-sgd-db, r-pasilla, and r-shiny.
[properties]: Tell updater to ignore r-gsealm.
Change-Id: I9512bbc7a96c328ee05e15bc898969494dca4be0
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 17 |
1 files changed, 15 insertions, 2 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 77f95366d1..ea68181e78 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11946,7 +11946,10 @@ region sets and other genomic features.") (snippet '(delete-file "inst/extdata/jslib/jquery-1.8.0.min.js")))) (properties - `((upstream-name . "ReportingTools"))) + `((upstream-name . "ReportingTools") + ;; This is mentioned in microarrayAnalysis.Rnw, but the package doesn't + ;; exist and apparently isn't needed after all. + (updater-ignored-native-inputs . ("r-gsealm")))) (build-system r-build-system) (arguments (list @@ -11987,7 +11990,17 @@ region sets and other genomic features.") r-r-utils r-xml)) (native-inputs - (list esbuild r-rmarkdown r-runit + (list esbuild + r-all + r-genefilter + r-hgu95av2-db + r-org-hs-eg-db + r-org-mm-eg-db + r-org-sc-sgd-db + r-pasilla + r-rmarkdown + r-runit + r-shiny (origin (method url-fetch) (uri "https://code.jquery.com/jquery-1.8.0.js") |