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authorRicardo Wurmus <rekado@elephly.net>2024-11-29 09:38:16 +0100
committerRicardo Wurmus <rekado@elephly.net>2024-12-03 16:59:58 +0100
commitcec92c060ec58e6e8981a0a042371a771d6ab91b (patch)
treeaf792f766fd9452231927d8b22ffcd435d90d338 /gnu/packages/bioconductor.scm
parent18c5a3b3246d49b89c235ed6ad287c543b159d59 (diff)
downloadguix-cec92c060ec58e6e8981a0a042371a771d6ab91b.tar.gz
guix-cec92c060ec58e6e8981a0a042371a771d6ab91b.zip
gnu: r-cytoml: Add missing inputs.
* gnu/packages/bioconductor.scm (r-cytoml)[native-inputs]: Add r-devtools, r-flowclust, r-flowstats, and r-flowworkspacedata. [properties]: Tell updater to keep extra inputs and ignore others. Change-Id: I64cfc0b2b424f537b086a7f2f91e1ef15631c461
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm12
1 files changed, 10 insertions, 2 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 48ac5ed1ac..ee83f021b3 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -20640,7 +20640,10 @@ sequential way to mimic the manual gating strategy.")
(sha256
(base32
"039rs6l92gjgvgh1nb8hfdg7h6dvak9hb5pjinli8x09iw08c463"))))
- (properties `((upstream-name . "CytoML")))
+ (properties
+ `((upstream-name . "CytoML")
+ (updater-extra-native-inputs . ("r-flowworkspacedata"))
+ (updater-ignored-native-inputs . ("r-old" "r-table"))))
(build-system r-build-system)
(inputs
(list libxml2))
@@ -20665,7 +20668,12 @@ sequential way to mimic the manual gating strategy.")
r-xml
r-yaml))
(native-inputs
- (list r-knitr r-testthat))
+ (list r-devtools
+ r-flowclust
+ r-flowstats
+ r-flowworkspacedata
+ r-knitr
+ r-testthat))
(home-page "https://github.com/RGLab/CytoML")
(synopsis "GatingML interface for cross platform cytometry data sharing")
(description