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authorRicardo Wurmus <rekado@elephly.net>2023-04-28 19:01:17 +0200
committerRicardo Wurmus <rekado@elephly.net>2023-04-29 20:28:03 +0200
commit974dba4509be4d03e5e1258e48efedf5c66cb746 (patch)
treeac8d204726a296b43a187c23b2a497a2f1a5fab7 /gnu/packages/bioconductor.scm
parent43b33d799243ad01bccdb6dafcadfd11f9256050 (diff)
downloadguix-974dba4509be4d03e5e1258e48efedf5c66cb746.tar.gz
guix-974dba4509be4d03e5e1258e48efedf5c66cb746.zip
gnu: r-cytoml: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.12.0. [inputs]: Remove zlib. [propagated-inputs]: Remove r-base64enc, r-corpcor, r-lattice, r-plyr, r-rcpp, r-rcpparmadillo, r-rcppparallel, r-runit, and r-xml2; add r-cpp11.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm19
1 files changed, 6 insertions, 13 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index cb21883ea0..e96e07f87e 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -15496,23 +15496,23 @@ sequential way to mimic the manual gating strategy.")
(define-public r-cytoml
(package
(name "r-cytoml")
- (version "2.10.0")
+ (version "2.12.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "CytoML" version))
(sha256
(base32
- "105vdmwwglknwk7x7cb6b2jf6bngbxsly0ymjf8175p2lfv98jsa"))))
+ "19rlg15nk2205vma4whpqmvlazww5i3ibxhmk9cljsaj4ql560vf"))))
(properties `((upstream-name . "CytoML")))
(build-system r-build-system)
(inputs
- (list libxml2 zlib))
+ (list libxml2 #;zlib
+ ))
(propagated-inputs
- (list r-base64enc
- r-bh
+ (list r-bh
r-biobase
- r-corpcor
+ r-cpp11
r-cytolib
r-data-table
r-dplyr
@@ -15521,20 +15521,13 @@ sequential way to mimic the manual gating strategy.")
r-ggcyto
r-graph
r-jsonlite
- r-lattice
r-opencyto
- r-plyr
r-rbgl
- r-rcpp
- r-rcpparmadillo
- r-rcppparallel
r-rgraphviz
r-rhdf5lib
r-rprotobuflib
- r-runit
r-tibble
r-xml
- r-xml2
r-yaml))
(native-inputs
(list r-knitr))