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| author | Roel Janssen <roel@gnu.org> | 2020-04-27 10:43:51 +0200 |
|---|---|---|
| committer | Roel Janssen <roel@gnu.org> | 2020-04-27 10:43:51 +0200 |
| commit | 8ce240fdbf05539b0d13f981b0520be5d84e0e61 (patch) | |
| tree | 8e00520a0785ae430ff1a866e7a4b7d8508d8687 /gnu/packages/bioconductor.scm | |
| parent | cb1ab0352b1f70dd1a5c56c7bd12de82c0b7fde5 (diff) | |
| download | guix-8ce240fdbf05539b0d13f981b0520be5d84e0e61.tar.gz guix-8ce240fdbf05539b0d13f981b0520be5d84e0e61.zip | |
gnu: Add r-bsgenome-hsapiens-ucsc-hg38.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg38): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index d74d1cf706..66ff6114c3 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -493,6 +493,30 @@ annotations for the genome of the model mouse Mus musculus.") by UCSC (hg19, February 2009) and stored in Biostrings objects.") (license license:artistic2.0))) +(define-public r-bsgenome-hsapiens-ucsc-hg38 + (package + (name "r-bsgenome-hsapiens-ucsc-hg38") + (version "1.4.1") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "BSgenome.Hsapiens.UCSC.hg38" + version 'annotation)) + (sha256 + (base32 + "1ql08pvi4vv0ynvg4qs9kysw1c7s3crkgin6zxvgzqk6fray9mvi")))) + (properties + `((upstream-name . "BSgenome.Hsapiens.UCSC.hg38"))) + (build-system r-build-system) + (propagated-inputs + `(("r-bsgenome" ,r-bsgenome))) + (home-page + "https://www.bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg38/") + (synopsis "Full genome sequences for Homo sapiens") + (description + "This package provides full genome sequences for Homo sapiens (Human) +as provided by UCSC (hg38, Dec. 2013) and stored in Biostrings objects.") + (license license:artistic2.0))) + (define-public r-ensdb-hsapiens-v75 (package (name "r-ensdb-hsapiens-v75") |