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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-11-29 18:45:47 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-12-03 16:59:58 +0100 |
| commit | 6a216a83170ea071cb7915d58dc2e27ffce9aec4 (patch) | |
| tree | 35be31a874a627bf9147a801002e12c56f0d815e /gnu/packages/bioconductor.scm | |
| parent | 79989a9f537157c7dc276d27d6c56339445f5388 (diff) | |
| download | guix-6a216a83170ea071cb7915d58dc2e27ffce9aec4.tar.gz guix-6a216a83170ea071cb7915d58dc2e27ffce9aec4.zip | |
gnu: Add r-rpx.
* gnu/packages/bioconductor.scm (r-rpx): New variable.
Change-Id: Id8b70a61d2657dfe5588f1cb67074d6fe5f1988c
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a85aaf7005..ebf0cadc9f 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9882,6 +9882,29 @@ of other R packages who wish to make use of HTSlib.") DNA methylation data at the genome scale.") (license license:gpl3))) +(define-public r-rpx + (package + (name "r-rpx") + (version "2.14.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "rpx" version)) + (sha256 + (base32 "0w2nxcd2v8rc3spi0rb96d3r7hp2dh7f7k50n0mik626fy1i0yc5")))) + (properties `((upstream-name . "rpx"))) + (build-system r-build-system) + ;; Tests require Internet access. + (arguments (list #:tests? #false)) + (propagated-inputs (list r-biocfilecache r-curl r-jsonlite r-rcurl r-xml2)) + (native-inputs (list r-biostrings r-knitr r-testthat r-tibble)) + (home-page "https://github.com/lgatto/rpx") + (synopsis "R interface to the ProteomeXchange Repository") + (description + "The rpx package implements an interface to proteomics data submitted to +the @code{ProteomeXchange} consortium.") + (license license:gpl2))) + (define-public r-impute (package (name "r-impute") |