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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 08:49:48 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 09:12:44 +0200 |
| commit | 5ce21e7153badd490eb98587bf5db2e77c36b8eb (patch) | |
| tree | c8bd8ae9a531fdb04c81cefbc783afe3e68a9879 /gnu/packages/bioconductor.scm | |
| parent | e22d743aa67da6ff4ea75da7f242385a4b0798e5 (diff) | |
| download | guix-5ce21e7153badd490eb98587bf5db2e77c36b8eb.tar.gz guix-5ce21e7153badd490eb98587bf5db2e77c36b8eb.zip | |
gnu: r-rtracklayer: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.52.0.
[propagated-inputs]: Add r-biocio and r-restfulr.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 9 |
1 files changed, 5 insertions, 4 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 12c5dfece8..16c2a79473 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3986,13 +3986,13 @@ tab-delimited (tabix) files.") (define-public r-rtracklayer (package (name "r-rtracklayer") - (version "1.50.0") + (version "1.52.0") (source (origin (method url-fetch) (uri (bioconductor-uri "rtracklayer" version)) (sha256 (base32 - "12zimhpdzjyzd81wrzz5hdbzvlgzcs22x1nnaf2jq4cba3ch5px8")))) + "0iic0g0clsjd9ypdmfs6k52hrnmfszhxzg0xx89nszpasf69wghv")))) (build-system r-build-system) (arguments `(#:phases @@ -4002,20 +4002,21 @@ tab-delimited (tabix) files.") (substitute* "DESCRIPTION" ((" zlibbioc,") "")) (substitute* "NAMESPACE" - (("import\\(zlibbioc\\)") "")) - #t))))) + (("import\\(zlibbioc\\)") ""))))))) (native-inputs `(("pkg-config" ,pkg-config))) (inputs `(("zlib" ,zlib))) (propagated-inputs `(("r-biocgenerics" ,r-biocgenerics) + ("r-biocio" ,r-biocio) ("r-biostrings" ,r-biostrings) ("r-genomeinfodb" ,r-genomeinfodb) ("r-genomicalignments" ,r-genomicalignments) ("r-genomicranges" ,r-genomicranges) ("r-iranges" ,r-iranges) ("r-rcurl" ,r-rcurl) + ("r-restfulr" ,r-restfulr) ("r-rsamtools" ,r-rsamtools) ("r-s4vectors" ,r-s4vectors) ("r-xml" ,r-xml) |