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authorRicardo Wurmus <rekado@elephly.net>2024-09-07 14:40:00 +0200
committerRicardo Wurmus <rekado@elephly.net>2024-09-08 14:23:21 +0200
commitcd836a65f0c84e4c05988f3d8ee2065b94b28edc (patch)
tree2810a67179c0d7ed8fa5653e66fba7f0630324cc /etc/guix-install.sh
parent08f7d3dd2f0e63e5b1c1a41598befe91e72604b5 (diff)
downloadguix-cd836a65f0c84e4c05988f3d8ee2065b94b28edc.tar.gz
guix-cd836a65f0c84e4c05988f3d8ee2065b94b28edc.zip
gnu: r-aer: Update to 1.2-13.
* gnu/packages/cran.scm (r-aer): Update to 1.2-13. Change-Id: I76318bdb9618ff338ec511728387d840383c14a1
Diffstat (limited to 'etc/guix-install.sh')
0 files changed, 0 insertions, 0 deletions
r's children upon build failure....Fixes <https://bugs.gnu.org/38062>. This is a followup to ada9a19a2dca74feafcf24df1152abd685d4142f. * nix/libstore/build.cc (DerivationGoal::killChild): Add conditional call to 'worker.childTerminated' for 'hook->pid'. Ludovic Courtès 2019-09-28daemon: Strictly respect timeouts for 'guix offload'....Until now it was up to 'guix offload' to honor timeouts. Unfortunately it would sometimes fail to do that, for example due to the libssh bug at <https://bugs.libssh.org/T33>. With this change, 'guix offload' is automatically killed by the daemon when one of the timeouts expires. Thus, data transfers performed by 'guix offload' now count as part of the timeouts, rather than just actual build time. * nix/libstore/build.cc (DerivationGoal::tryBuildHook): Pass true as the 'respectTimeouts' argument to 'childStarted'. Ludovic Courtès 2019-09-08daemon: Run 'guix substitute' directly and assume a single substituter....The daemon had a mechanism that allows it to handle a list of substituters and try them sequentially; this removes it. * nix/scripts/substitute.in: Remove. * nix/local.mk (nodist_pkglibexec_SCRIPTS): Remove. * config-daemon.ac: Don't output 'nix/scripts/substitute'. * nix/libstore/build.cc (SubstitutionGoal)[subs, sub, hasSubstitute]: Remove. [tryNext]: Make private. (SubstitutionGoal::SubstitutionGoal, SubstitutionGoal::init): Remove now unneeded initializers. (SubstitutionGoal::tryNext): Adjust to assume a single substituter: call 'amDone' upfront when we couldn't find substitutes. (SubstitutionGoal::tryToRun): Adjust to run 'guix substitute' via 'settings.guixProgram'. (SubstitutionGoal::finished): Call 'amDone(ecFailed)' upon failure instead of setting 'state' to 'tryNext'. * nix/libstore/globals.hh (Settings)[substituters]: Remove. * nix/libstore/local-store.cc (LocalStore::~LocalStore): Adjust to handle a single substituter. (LocalStore::startSubstituter): Remove 'path' parameter. Adjust to invoke 'settings.guixProgram'. Don't refer to 'run.program', which no longer exists. (LocalStore::querySubstitutablePaths): Adjust for 'runningSubstituters' being a singleton instead of a list. (LocalStore::querySubstitutablePathInfos): Likewise, and remove 'substituter' parameter. * nix/libstore/local-store.hh (RunningSubstituter)[program]: Remove. (LocalStore)[runningSubstituters]: Remove. [runningSubstituter]: New field. [querySubstitutablePathInfos]: Remove 'substituter' parameter. [startSubstituter]: Remove 'substituter' parameter. * nix/nix-daemon/guix-daemon.cc (main): Remove references to 'settings.substituters'. * nix/nix-daemon/nix-daemon.cc (performOp): Ignore the user's "build-use-substitutes" value when 'settings.useSubstitutes' is false. Ludovic Courtès 2019-09-08daemon: Run 'guix offload' directly....* nix/scripts/offload.in: Remove. * nix/local.mk (nodist_pkglibexec_SCRIPTS) [BUILD_DAEMON_OFFLOAD]: Remove 'scripts/offload'. * config-daemon.ac: Don't output 'nix/scripts/offload'. * build-aux/pre-inst-env.in: Don't set 'NIX_BUILD_HOOK'. * nix/libstore/build.cc (HookInstance::HookInstance): Run 'guix offload'. (DerivationGoal::tryBuildHook): Remove reference to 'NIX_BUILD_HOOK'. * nix/nix-daemon/guix-daemon.cc (main) [HAVE_DAEMON_OFFLOAD_HOOK]: Don't set 'NIX_BUILD_HOOK'. * nix/nix-daemon/nix-daemon.cc (performOp) [!HAVE_DAEMON_OFFLOAD_HOOK]: Leave 'settings.useBuildHook' unchanged. Ludovic Courtès 2019-06-13daemon: Replace "illegal" by "invalid" in error messages....* nix/libstore/build.cc (parseReferenceSpecifiers): Replace "illegal" by "invalid". * nix/libstore/globals.cc (Settings::pack): Likewise. * nix/libstore/store-api.cc (checkStoreName): Likewise. Ludovic Courtès 2019-02-06daemon: Emit a 'build-succeeded' event in check mode....Until now, something like "guix build sed -v1 --check" would not get a 'build-succeeded' event, which in turn meant that the spinner would not be erased upon build completion. * nix/libstore/build.cc (DerivationGoal::registerOutputs): When 'buildMode' is bmCheck and 'settings.printBuildTrace' emit a "@ build-succeeded" trace upon success. * tests/store.scm ("build-succeeded trace in check mode"): New test. Ludovic Courtès 2018-12-16daemon: Use unbranded phrases in comments and messages....* nix/libstore/build.cc, nix/libstore/globals.cc, nix/libstore/gc.cc, nix/libstore/local-store.cc, nix/libstore/optimise-store.cc, nix/libstore/store-api.cc, nix/libutil/archive.cc, nix/nix-daemon/nix-daemon.cc: Replace "Nix store" by "store", and "Nix daemon" by "build daemon". Ludovic Courtès 2018-10-15daemon: Support multiplexed build output....This allows clients to tell whether output comes from the daemon or, if it comes from a builder, from which builder it comes. The latter is particularly useful when MAX-BUILD-JOBS > 1. * nix/libstore/build.cc (DerivationGoal::tryBuildHook) (DerivationGoal::startBuilder): Print the child's PID in "@ build-started" traces. (DerivationGoal::handleChildOutput): Define 'prefix', pass it to 'writeToStderr'. * nix/libstore/globals.cc (Settings:Settings): Initialize 'multiplexedBuildOutput'. (Settings::update): Likewise. * nix/libstore/globals.hh (Settings)[multiplexedBuildOutput]: New field. Update 'printBuildTrace' documentation. * nix/libstore/worker-protocol.hh (PROTOCOL_VERSION): Bump to 0.163. * nix/nix-daemon/nix-daemon.cc (performOp) <wopSetOptions>: Special-case "multiplexed-build-output" and remove "use-ssh-substituter". * guix/store.scm (set-build-options): Add #:multiplexed-build-output? and honor it. (%protocol-version): Bump to #x163. * tests/store.scm ("multiplexed-build-output"): New test. fixlet Ludovic Courtès 2018-09-27Add (guix status) and use it for pretty colored output....* guix/progress.scm (progress-reporter/trace): New procedure. (%progress-interval): New variable. (progress-reporter/file): Use it. * guix/scripts/build.scm (set-build-options-from-command-line): Pass #:print-extended-build-trace?. (%default-options): Add 'print-extended-build-trace?'. (guix-build): Parameterize CURRENT-TERMINAL-COLUMNS. Use 'build-status-updater'. * guix/scripts/environment.scm (%default-options): Add 'print-extended-build-trace?'. (guix-environment): Wrap body in 'with-status-report'. * guix/scripts/pack.scm (%default-options): Add 'print-build-trace?' and 'print-extended-build-trace?'. (guix-pack): Wrap body in 'with-status-report'. * guix/scripts/package.scm (%default-options, guix-package): Likewise. * guix/scripts/system.scm (%default-options, guix-system): Likewise. * guix/scripts/pull.scm (%default-options, guix-pull): Likewise. * guix/scripts/substitute.scm (progress-report-port): Don't call STOP when TOTAL is zero. (process-substitution): Add #:print-build-trace? and honor it. (guix-substitute)[print-build-trace?]: New variable. Pass #:print-build-trace? to 'process-substitution'. * guix/status.scm: New file. * guix/store.scm (set-build-options): Add #:print-extended-build-trace?; pass it into PAIRS. (%protocol-version): Bump. (protocol-version, nix-server-version): New procedures. (current-store-protocol-version): New variable. (with-store, build-things): Parameterize it. * guix/ui.scm (build-output-port): Remove. (colorize-string): Export. * po/guix/POTFILES.in: Add guix/status.scm. * tests/status.scm: New file. * Makefile.am (SCM_TESTS): Add it. * nix/libstore/worker-protocol.hh (PROTOCOL_VERSION): Bump to 0x162. * nix/libstore/build.cc (DerivationGoal::registerOutputs) (SubstitutionGoal::finished): Print a "@ hash-mismatch" trace before throwing. Ludovic Courtès 2018-05-17daemon: Allow building for armhf-linux on aarch64-linux....* nix/libstore/build.cc (canBuildLocally): Allow building armhf-linux builds on aarch64-linux. (DerivationGoal::runChild) Throw error if attempting to build for armhf-linux on an unsupported platform. * doc/guix.texi (Invoking guix build): Document how to build natively for armhf-linux on aarch64-linux. Add note that on some aarch64 machines this is unsupported. Efraim Flashner 2018-01-11daemon: Always try to execute the builder regardless of the platform....* nix/libstore/build.cc (runChild): Move platform check after 'execve' call. Check specifically for ENOEXEC. Ludovic Courtès 2018-01-07daemon: Make libbz2 an optional dependency....* config-daemon.ac: Don't bail out when libbz2 is missing. Define 'HAVE_LIBBZ2' Automake conditional. * nix/libstore/build.cc: Wrap relevant bits in '#if HAVE_BZLIB_H'. * nix/libstore/globals.cc (Settings::Settings): 'logCompression' defaults to COMPRESSION_GZIP when HAVE_BZLIB_H is false. * nix/libstore/globals.hh (CompressionType): Make 'COMPRESSION_BZIP2' conditional on HAVE_BZLIB_H. * nix/local.mk (guix_register_LDADD, guix_daemon_LDADD): Add -lbz2 only when HAVE_LIBBZ2. * nix/nix-daemon/guix-daemon.cc (parse_opt): Ignore "bzip2" when not HAVE_BZLIB_H. Ludovic Courtès 2018-01-07daemon: Add gzip log compression....* nix/nix-daemon/guix-daemon.cc (GUIX_OPT_LOG_COMPRESSION): New macro. (options): Mark "disable-log-compression" as hidden and add "log-compression". (parse_opt): Handle GUIX_OPT_LOG_COMPRESSION. * nix/libstore/build.cc (DerivationGoal): Add 'gzLogFile'. (openLogFile): Initialize it when 'logCompression' is COMPRESSION_GZIP. (closeLogFile, handleChildOutput): Honor 'gzLogFile'. * nix/libstore/globals.hh (Settings)[compressLog]: Remove. [logCompression]: New field. (CompressionType): New enum. * nix/libstore/globals.cc (Settings::Settings): Initialize it. (update): Remove '_get' call for 'compressLog'. * nix/local.mk (guix_daemon_LDADD, guix_register_LDADD): Add -lz. * guix/store.scm (log-file): Handle '.gz' log files. * tests/guix-daemon.sh: Add test with '--log-compression=gzip'. * doc/guix.texi (Invoking guix-daemon): Adjust accordingly. * config-daemon.ac: Check for libz and zlib.h. Ludovic Courtès 2017-08-18Simplify remouting with MS_PRIVATE in sandbox build...also fix race condition if mounts are added after mountinfo is read. Jörg Thalheim 2017-08-07daemon: Ensure the child stack is aligned on a 16-byte boundary....* nix/libstore/build.cc (DerivationGoal::startBuilder): When calling 'clone', ensure that the stack is aligned on a 16-byte boundary. Mark H Weaver 2017-08-05daemon: On aarch64, use increments of 16 on the stack....* nix/libstore/build.cc (DerivationGoal::startBuilder): When on aarch64, when calling clone(), increment the stack by 16. Efraim Flashner 2017-08-05Revert "daemon: Ensure proper alignment on the stack."...This reverts commit ab4ccc8fcfaf2215d4b33b1376147e4c2c70426a. Mark H Weaver 2017-05-30daemon: Report hash mismatches in a cleaner way....Suggested by Hartmut Goebel. * nix/libstore/build.cc (DerivationGoal::registerOutputs): Report hash mismatches on 3 lines for clarity. (SubstitutionGoal::finished): Likewise. Ludovic Courtès 2017-02-20daemon: Ensure proper alignment on the stack....* nix/libstore/build.cc (startBuilder): When calling 'clone', increase the step to 16 and ensure it aligns properly on the stack. Efraim Flashner 2017-01-11daemon: Allow check builds of 'builtin:download' derivations....Fixes <http://bugs.gnu.org/25089>. Reported by Leo Famulari <leo@famulari.name>. * nix/libstore/build.cc (DerivationGoal::runChild): In the 'isBuiltin' case, check whether DRV's output is in 'redirectedOutputs', and pass an 'output' argument to the built-in builder. (DerivationGoal::addHashRewrite): Add 'printMsg' call. * nix/libstore/builtins.hh (derivationBuilder): Add 'output' parameter. * nix/libstore/builtins.cc (builtinDownload): Likewise. Add OUTPUT to ARGV. * guix/scripts/perform-download.scm (perform-download): Add 'output' parameter. (guix-perform-download): Adjust 'match' clauses accordingly. * tests/derivations.scm ("'download' built-in builder, check mode"): New test. Ludovic Courtès 2016-12-29daemon: Allow fixed-output derivation builds with TMPDIR set....Fixes <http://bugs.gnu.org/25242>. Reported by Leo Famulari <leo@famulari.name>. The regression was introduced in 94d92c7796a3dd50c27d532315f7d497ac99f08e. * nix/libstore/build.cc (DerivationGoal::startBuilder): Set 'useChroot' as a function 'of isBuiltin(drv)'. (DerivationGoal::runChild): Use 'useChroot' instead of 'useChroot && !isBuiltin(drv)'. Ludovic Courtès 2016-12-09daemon: Set ownership of kept build directories to the calling user....Fixes <http://bugs.gnu.org/15890>. * nix/libstore/globals.hh (Settings) Add clientUid and clientGid. * nix/nix-daemon/nix-daemon.cc (daemonLoop] Store UID and GID of the caller in settings. * nix/libstore/build.cc (_chown): New function. (DerivationGoal::deleteTmpDir): Use it, change ownership of build directory if it is kept and the new owner is not root. Hartmut Goebel 2016-11-16daemon: Add "builtin:download" derivation builder....This ensures that 1) the derivation doesn't change when Guix changes; 2) the derivation closure doesn't contain Guix and its dependencies; 3) we don't have to rely on ugly chroot hacks. Adapted from Nix commit 0a2bee307b20411f5b0dda0c662b1f9bb9e0e131. * nix/libstore/build.cc (DerivationGoal::runChild): Add special case for 'isBuiltin(drv)'. Disable chroot when 'isBuiltin(drv)'. * nix/libstore/builtins.cc, nix/libstore/builtins.hh, nix/scripts/download.in, guix/scripts/perform-download.scm: New files. * guix/ui.scm (show-guix-help)[internal?]: Add 'perform-download'. * nix/local.mk (libstore_a_SOURCES): Add builtins.cc. (libstore_headers): Add builtins.hh. (nodist_pkglibexec_SCRIPTS): Add 'scripts/download'. * config-daemon.ac: Emit 'scripts/download'. * Makefile.am (MODULES): Add 'guix/scripts/perform-download.scm'. * tests/derivations.scm ("unknown built-in builder") ("'download' built-in builder") ("'download' built-in builder, invalid hash") ("'download' built-in builder, not found") ("'download' built-in builder, not fixed-output"): New tests. Co-authored-by: Eelco Dolstra <eelco.dolstra@logicblox.com> Ludovic Courtès 2016-05-31daemon: Fix typo....Fixes a regression/typo introduced in e08380fb6cefd3fd67c3c220a3ddaf385e6413cf. * nix/libstore/build.cc (DerivationGoal::startBuilder): Canonicalize "/tmp", not "/tmp/guix-build". Ludovic Courtès 2016-05-31daemon: rounds: Keep the differing output if -K is given....Regardless of -K, we now also print which output differs. Eelco Dolstra 2016-05-31daemon: check: Keep the differing output if -K is given....This makes it easier to investigate the non-determinism, e.g. $ nix-build pkgs/stdenv/linux -A stage1.pkgs.zlib --check -K error: derivation ‘/nix/store/l54i8wlw22656i4pk05c52ngv9rpl39q-zlib-1.2.8.drv’ may not be deterministic: output ‘/nix/store/11a27shh6n2ivi4a7s964i65ql80cf27-zlib-1.2.8’ differs from ‘/nix/store/11a27shh6n2ivi4a7s964i65ql80cf27-zlib-1.2.8-check’ $ diffoscope /nix/store/11a27shh6n2ivi4a7s964i65ql80cf27-zlib-1.2.8 /nix/store/11a27shh6n2ivi4a7s964i65ql80cf27-zlib-1.2.8-check ... ├── lib/libz.a │ ├── metadata │ │ @@ -1,15 +1,15 @@ │ │ -rw-r--r-- 30001/30000 3096 Jan 12 15:20 2016 adler32.o ... │ │ +rw-r--r-- 30001/30000 3096 Jan 12 15:28 2016 adler32.o ... Co-authored-by: Ludovic Courtès <ludo@gnu.org> Eelco Dolstra 2016-05-31daemon: check: Fix "failed to produce output path"....This occured when sandbox building is disabled, at least one output exists, and at least one other output does not. Eelco Dolstra 2016-05-31daemon: check: Fix assertion failure when some outputs are missing....E.g. $ nix-build pkgs/stdenv/linux/ -A stage1.pkgs.perl --check nix-store: src/libstore/build.cc:1323: void nix::DerivationGoal::tryToBuild(): Assertion `buildMode != bmCheck || validPaths.size() == drv->outputs.size()' failed. when perl.out exists but perl.man doesn't. The fix is to only check the outputs that exist. Note that "nix-build -A stage1.pkgs.all --check" will still give a (proper) error in this case. Eelco Dolstra 2016-05-31daemon: When repairing, rebuild if there is no substituter.Eelco Dolstra 2016-05-31daemon: Fix --repair failure on multiple-output derivations....If repair found a corrupted/missing path that depended on a multiple-output derivation, and some of the outputs of the latter were not present, it failed with a message like error: path ‘/nix/store/cnfn9d5fjys1y93cz9shld2xwaibd7nn-bash-4.3-p42-doc’ is not valid Co-authored-by: Ludovic Courtès <ludo@gnu.org> Eelco Dolstra 2016-05-31daemon: Handle /tmp being a symlink....* nix/libstore/build.cc (DerivationGoal::startBuilder): Call 'canonPath' on "/tmp". Eelco Dolstra 2015-12-30daemon: Build in /tmp/guix-build-*....* nix/libstore/build.cc (DerivationGoal::startBuilder): Use "guix-build" instead of "nix-build" for TMPDIR. * doc/guix.texi (Build Environment Setup): Adjust accordingly. Ludovic Courtès 2015-12-13daemon: Better distinguish build statuses....In Nix itself, the new 'BuildResult' type is returned by the new 'buildDerivation' method, which we don't have and need. * nix/libstore/build.cc (Goal)[cancel]: Remove. [timeOut]: New pure virtual method. (DerivationGoal)[result]: New field. [cancel]: Remove. [timedOut, getResult, done]: New methods. (DerivationGoal::cancel): Remove. (DerivationGoal::timedOut): New method. (DerivationGoal::haveDerivation): Call 'done' instead of 'amDone'. (DerivationGoal::outputsSubstituted): Ditto. (DerivationGoal::inputsRealised): Ditto. (DerivationGoal::buildDone): Ditto. (DerivationGoal::handleChildOutput): Call 'timedOut' instead of 'cancel'. (DerivationGoal::done): New method. (SubstitutionGoal)[cancel]: Remove. [timedOut]: New method. (SubstitutionGoal::cancel): Remove. (SubstitutionGoal::timedOut): New method. (Worker::waitForInput): Use it. * nix/libstore/store-api.hh (BuildResult): New struct. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Eelco Dolstra 2015-12-09daemon: Use deterministic $TMPDIR in chroot....Rather than using $<host-TMPDIR>/nix-build-<drvname>-<number>, the temporary directory is now always /tmp/nix-build-<drvname>-0. This improves bitwise-exact reproducibility for builds that store $TMPDIR in their build output. (Of course, those should still be fixed...) * nix/libstore/build.cc (DerivationGoal)[tmpDirInSandbox]: New field. (DerivationGoal::startBuilder): Initialize 'useChroot' earlier. Compute 'tmpDirInSandbox', and use it when populating 'dirsInChroot'. * doc/guix.texi (Build Environment Setup): Document it. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Eelco Dolstra 2015-12-08daemon: Allow builds to be repeated....This makes it easy to detect non-deterministic builds. * nix/libstore/build.cc (DerivationGoal): Remove 'InodesSeen'; add 'curRound', 'nrRound', and 'prevInfos'. (DerivationGoal::inputsRealised): Initialize 'nrRound'. (NotDeterministic): New error type. (DerivationGoal::buildDone): Check whether we need to repeat. (DerivationGoal::startBuilder): Adjust message. (DerivationGoal::registerOutputs): Check whether we get the same result. * nix/libstore/globals.cc (Settings::get(const string & name, int def)): New method. * nix/libstore/globals.hh (Settings): Add it. * nix/libstore/store-api.hh (ValidPathInfo): Add operator ==. * nix/nix-daemon/nix-daemon.cc (performOp): Allow "build-repeat" for "untrusted" users. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Eelco Dolstra