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authorRicardo Wurmus <rekado@elephly.net>2019-05-05 23:41:50 +0200
committerRicardo Wurmus <rekado@elephly.net>2019-05-06 00:14:39 +0200
commitfbf34949729029702e14691de54ddc333392175d (patch)
treea9d1e842796ec17d77d23cbb056916843d4786b5
parentfab5f7c8d94975c734b668b0cc04e599a5a38540 (diff)
downloadguix-fbf34949729029702e14691de54ddc333392175d.tar.gz
guix-fbf34949729029702e14691de54ddc333392175d.zip
gnu: Add r-biocfilecache.
* gnu/packages/bioconductor.scm (r-biocfilecache): New variable.
-rw-r--r--gnu/packages/bioconductor.scm30
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index b18c5bf9c2..e79bb0937a 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4303,3 +4303,33 @@ expression\".")
method} (ARRm) for the normalization of methylation data from the Illumina
Infinium HumanMethylation 450k assay.")
(license license:artistic2.0)))
+
+(define-public r-biocfilecache
+ (package
+ (name "r-biocfilecache")
+ (version "1.8.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "BiocFileCache" version))
+ (sha256
+ (base32
+ "1mi8p8hvrdxim8lqsid2cb7284imyjf9rlzsrdlzdjac7dp9bpdb"))))
+ (properties `((upstream-name . "BiocFileCache")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-curl" ,r-curl)
+ ("r-dbi" ,r-dbi)
+ ("r-dbplyr" ,r-dbplyr)
+ ("r-dplyr" ,r-dplyr)
+ ("r-httr" ,r-httr)
+ ("r-rappdirs" ,r-rappdirs)
+ ("r-rsqlite" ,r-rsqlite)))
+ (home-page "https://bioconductor.org/packages/BiocFileCache/")
+ (synopsis "Manage files across sessions")
+ (description
+ "This package creates a persistent on-disk cache of files that the user
+can add, update, and retrieve. It is useful for managing resources (such as
+custom Txdb objects) that are costly or difficult to create, web resources,
+and data files used across sessions.")
+ (license license:artistic2.0)))