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authorRicardo Wurmus <rekado@elephly.net>2024-11-28 10:58:00 +0100
committerRicardo Wurmus <rekado@elephly.net>2024-12-03 16:59:56 +0100
commitf0480849b8805405d70123acb7c75c58b3bab04f (patch)
tree65c9cd093371def4b2bad3293d168082076e1d77
parentb935741c09e22689678adefbe1010ee7f755d095 (diff)
downloadguix-f0480849b8805405d70123acb7c75c58b3bab04f.tar.gz
guix-f0480849b8805405d70123acb7c75c58b3bab04f.zip
gnu: r-ggcyto: Add missing inputs.
* gnu/packages/bioconductor.scm (r-ggcyto)[native-inputs]: Add r-flowworkspacedata, r-opencyto, and r-vdiffr. [properties]: Tell updater to add r-flowworkspacedata and ignore r-flowstats. Change-Id: If281e4b930f99e18ccbd07fed7028ba932496c3c
-rw-r--r--gnu/packages/bioconductor.scm8
1 files changed, 6 insertions, 2 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 304407035c..c40febaa73 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -20258,7 +20258,11 @@ manipulation of flow cytometry data.")
(sha256
(base32
"0a74lb36482djxfr77akyqqa7wnj9y3g4fkn8ain2gsbb3l6kcbk"))))
- (properties `((upstream-name . "ggcyto")))
+ (properties
+ `((upstream-name . "ggcyto")
+ ;; Avoid dependency cycle.
+ (updater-ignored-native-inputs . ("r-flowstats"))
+ (updater-extra-native-inputs . ("r-flowworkspacedata"))))
(build-system r-build-system)
(propagated-inputs
(list r-data-table
@@ -20273,7 +20277,7 @@ manipulation of flow cytometry data.")
r-rlang
r-scales))
(native-inputs
- (list r-knitr r-testthat))
+ (list r-flowworkspacedata r-knitr r-opencyto r-testthat r-vdiffr))
(home-page "https://github.com/RGLab/ggcyto/issues")
(synopsis "Visualize Cytometry data with ggplot")
(description