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| author | Nicolas Graves <ngraves@ngraves.fr> | 2025-04-06 14:37:13 +0200 |
|---|---|---|
| committer | Andreas Enge <andreas@enge.fr> | 2025-04-16 11:46:31 +0200 |
| commit | ea99274af37eecda72923ec998e5917652bc3a49 (patch) | |
| tree | fc4fedd56bff7a0f62a245e1319cb4a5c1dff6c0 | |
| parent | 0d41651da2de90eebdad1632d5d55fb7c588f39e (diff) | |
| download | guix-ea99274af37eecda72923ec998e5917652bc3a49.tar.gz guix-ea99274af37eecda72923ec998e5917652bc3a49.zip | |
gnu: cnvkit: Update to 0.9.12.
* gnu/packages/bioinformatics.scm (cnvkit): Update to 0.9.12.
[build-system]: Switch to pyproject.
[native-inputs]: Add python-setuptools, python-wheel.
Change-Id: Ia48f681ac2c45872c92214d685819579a40eae7a
Signed-off-by: Steve George <steve@futurile.net>
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 74c95a6f39..e1cac1f149 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -21217,7 +21217,7 @@ polymorphisms) and indels with respect to a reference genome and more.") (define-public cnvkit (package (name "cnvkit") - (version "0.9.10") + (version "0.9.12") (source (origin (method git-fetch) @@ -21226,7 +21226,7 @@ polymorphisms) and indels with respect to a reference genome and more.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0r303pqjg70zpxa564bavbfj99c6di0dafgqqwx2vh4vfsiif94q")))) + (base32 "090yh17symcahddx399kcx0mcw4gdrcc2jil3p8lb92r8c8kglb5")))) (build-system pyproject-build-system) (propagated-inputs (list python-biopython @@ -21243,7 +21243,7 @@ polymorphisms) and indels with respect to a reference genome and more.") ;; R packages r-dnacopy)) (inputs (list r-minimal)) ;for tests - (native-inputs (list python-setuptools python-wheel)) + (native-inputs (list python-pytest python-setuptools python-wheel)) (home-page "https://cnvkit.readthedocs.org/") (synopsis "Copy number variant detection from targeted DNA sequencing") (description |