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authorRicardo Wurmus <rekado@elephly.net>2025-05-11 11:45:40 +0200
committerRicardo Wurmus <rekado@elephly.net>2025-05-12 08:55:51 +0200
commite4e43cebbacbbb7982d08f691636f3234fd60184 (patch)
tree18017bcc3e91bb4f2955f0f21df9def267140626
parentb927cbe70df202db788aa9a443acc78ebf1ee7cb (diff)
downloadguix-e4e43cebbacbbb7982d08f691636f3234fd60184.tar.gz
guix-e4e43cebbacbbb7982d08f691636f3234fd60184.zip
gnu: r-chromunity: Update to 0.0.2-2.101e30a.
* gnu/packages/bioinformatics.scm (r-chromunity): Update to 0.0.2-2.101e30a. [arguments]: Disable one test. Change-Id: I522e993d86cf88914a95c9fb15d933c7af906c41
-rw-r--r--gnu/packages/bioinformatics.scm16
1 files changed, 13 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 7995aaab1b..a66f4518ae 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -13024,8 +13024,8 @@ tasks.")
(license license:expat))))
(define-public r-chromunity
- (let ((commit "712e56ccba64e8881dbb203546379a5c3c639bb2")
- (revision "1"))
+ (let ((commit "101e30aafef23b4d8a4fba40375bf7d13a7c0b11")
+ (revision "2"))
(package
(name "r-chromunity")
(version (git-version "0.0.2" revision commit))
@@ -13037,9 +13037,19 @@ tasks.")
(file-name (git-file-name name version))
(sha256
(base32
- "0sdja11l7bg5rmcbp2cl226cq9qrj3r8kq5lg49zbin83hya27vh"))))
+ "1fq6l9xn6zl1nqr6ny2575r3iqmhf8dgsd7rxaglm6a7fy3r8zx7"))))
(properties `((upstream-name . "chromunity")))
(build-system r-build-system)
+ (arguments
+ (list
+ #:phases
+ '(modify-phases %standard-phases
+ (add-after 'unpack 'disable-bad-tests
+ (lambda _
+ ;; This test operates on a NULL object.
+ (substitute* "tests/testthat/test_chromunity.R"
+ ((".*synergy.*" m)
+ (string-append m "skip('guix')\n"))))))))
(propagated-inputs
(list r-arrow
r-biocgenerics