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| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2023-03-25 00:18:53 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-10-04 11:03:23 +0200 |
| commit | b84f6c2c0ea9aad9c8db2d70fb78f857a7f1a986 (patch) | |
| tree | 248919c47aacbd21f23c2b51310048796be5b3fc | |
| parent | 9f08080b38651f0a58488aa1f4b5e7a5431717ac (diff) | |
| download | guix-b84f6c2c0ea9aad9c8db2d70fb78f857a7f1a986.tar.gz guix-b84f6c2c0ea9aad9c8db2d70fb78f857a7f1a986.zip | |
gnu: Add r-mdqc.
* gnu/packages/bioconductor.scm (r-mdqc): New variable.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a282b1a3d0..4bb9c35d4c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8121,6 +8121,31 @@ experiments.") and visualizaton of alternative splicing events generated by rMATS.") (license license:expat))) +(define-public r-mdqc + (package + (name "r-mdqc") + (version "1.62.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "mdqc" version)) + (sha256 + (base32 "0y35z9sw3h77a5g4ah0fxrk5xh7irdw9z0y2jhh6dp0xxcqh6i0k")))) + (properties `((upstream-name . "mdqc"))) + (build-system r-build-system) + (propagated-inputs + (list r-cluster + r-mass)) + (home-page "https://bioconductor.org/packages/mdqc") + (synopsis "Mahalanobis distance quality control for microarrays") + (description + "MDQC is a multivariate quality assessment method for microarrays based +on quality control (QC) reports. The Mahalanobis distance of an array's +quality attributes is used to measure the similarity of the quality of that +array against the quality of the other arrays. Then, arrays with unusually +high distances can be flagged as potentially low-quality.") + (license license:lgpl2.0+))) + (define-public r-metagenomeseq (package (name "r-metagenomeseq") |