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| author | Marius Bakke <marius@gnu.org> | 2021-12-04 12:12:11 +0100 |
|---|---|---|
| committer | Marius Bakke <marius@gnu.org> | 2021-12-05 14:02:10 +0100 |
| commit | b507cc49abb5492f992aff08f0931365bd4ccd4e (patch) | |
| tree | c83193f91ce0884d4a880ed2004888704f3ee19c | |
| parent | a2584a08bec4c4c448522ff3d93d99553c4667f6 (diff) | |
| download | guix-b507cc49abb5492f992aff08f0931365bd4ccd4e.tar.gz guix-b507cc49abb5492f992aff08f0931365bd4ccd4e.zip | |
gnu: python-pyvcf: Fix bytecode compilation.
* gnu/packages/bioinformatics.scm (python-pyvcf)[arguments]: Add phase to
patch sample script.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 6 |
1 files changed, 6 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 453b512aa3..fb3ceb8c83 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -15270,6 +15270,12 @@ for the analysis and visualization of raw nanopore signal.") (arguments `(#:phases (modify-phases %standard-phases + (add-after 'unpack 'patch-sample-script + (lambda _ + ;; Add Python 3 compatibility to this sample script. + (substitute* "scripts/vcf_sample_filter.py" + (("print (.*)\n" _ arg) + (string-append "print(" arg ")\n"))))) (add-after 'install 'remove-installed-tests ;; Do not install test files. (lambda* (#:key inputs outputs #:allow-other-keys) |