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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 08:50:06 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 09:12:53 +0200 |
| commit | 9ed2ec5bffe4fae0c30272344096b2cb56765d18 (patch) | |
| tree | 04760813474012dd76a13c337c8b52cc091ce4dd | |
| parent | 53c041713a1139b301aab89ba42bed0c11c5958e (diff) | |
| download | guix-9ed2ec5bffe4fae0c30272344096b2cb56765d18.tar.gz guix-9ed2ec5bffe4fae0c30272344096b2cb56765d18.zip | |
gnu: r-flowsom: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.0.0.
[propagated-inputs]: Remove r-tsne; add r-colorramps, r-dplyr, r-ggforce, r-ggnewscale,
r-ggplot2, r-ggpointdensity, r-ggpubr, r-ggrepel, r-magrittr,
r-pheatmap, r-rlang, r-rtsne, r-scattermore, and r-tidyr.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 19 |
1 files changed, 16 insertions, 3 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 71fa213a87..3388d93ad2 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9774,25 +9774,38 @@ standard to exchange gated cytometry data with other software platforms.") (define-public r-flowsom (package (name "r-flowsom") - (version "1.22.0") + (version "2.0.0") (source (origin (method url-fetch) (uri (bioconductor-uri "FlowSOM" version)) (sha256 (base32 - "0gydp6q6zqkadw356k9br646zfynz8gk9ckbx9d297x503j5sgwf")))) + "18h7p7g3w9imyd1c93jllgp4kd74z96cs85wcqfhmd26nx18hl82")))) (properties `((upstream-name . "FlowSOM"))) (build-system r-build-system) (propagated-inputs `(("r-biocgenerics" ,r-biocgenerics) + ("r-colorramps" ,r-colorramps) ("r-consensusclusterplus" ,r-consensusclusterplus) ("r-cytoml" ,r-cytoml) + ("r-dplyr" ,r-dplyr) ("r-flowcore" ,r-flowcore) ("r-flowworkspace" ,r-flowworkspace) + ("r-ggforce" ,r-ggforce) + ("r-ggnewscale" ,r-ggnewscale) + ("r-ggplot2" ,r-ggplot2) + ("r-ggpointdensity" ,r-ggpointdensity) + ("r-ggpubr" ,r-ggpubr) + ("r-ggrepel" ,r-ggrepel) ("r-igraph" ,r-igraph) + ("r-magrittr" ,r-magrittr) + ("r-pheatmap" ,r-pheatmap) ("r-rcolorbrewer" ,r-rcolorbrewer) - ("r-tsne" ,r-tsne) + ("r-rlang" ,r-rlang) + ("r-rtsne" ,r-rtsne) + ("r-scattermore" ,r-scattermore) + ("r-tidyr" ,r-tidyr) ("r-xml" ,r-xml))) (home-page "https://bioconductor.org/packages/FlowSOM/") (synopsis "Visualize and interpret cytometry data") |