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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-12-16 19:09:51 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2025-01-20 21:37:21 +0100 |
| commit | 9b13e9513511487d5c74b4a3da550b5d42d70b59 (patch) | |
| tree | 89f88b94a49d3eb37f1dbfc499806d38ff7c72f7 | |
| parent | 71327fc365f4325975c605b9bf1bb99ddb401811 (diff) | |
| download | guix-9b13e9513511487d5c74b4a3da550b5d42d70b59.tar.gz guix-9b13e9513511487d5c74b4a3da550b5d42d70b59.zip | |
gnu: python-numcodecs: Update to 0.13.1.
* gnu/packages/python-xyz.scm (python-numcodecs): Update to 0.13.1.
[source]: Update snippet.
[arguments]: Update selected tests.
[propagated-inputs]: Add python-coverage, python-google-crc32c,
python-importlib-metadata, and python-numpydoc; remove python-entrypoints and
python-typing-extensions.
[native-inputs]: Add python-py-cpuinfo, python-pydata-sphinx-theme,
python-pytest-cov, python-sphinx, and python-sphinx-issues.
Change-Id: Ib2dfc457923c0a435a09ce6d7879090e641b095c
| -rw-r--r-- | gnu/packages/python-xyz.scm | 42 |
1 files changed, 22 insertions, 20 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 4360a70007..ca7defd70c 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -29205,15 +29205,16 @@ tool).") (define-public python-numcodecs (package (name "python-numcodecs") - ;; XXX: Starting from 0.11.0 numcodecs requires NumPy 1.7 or higher. - (version "0.10.2") + (version "0.13.1") + ;; python-zarr does not want versions 0.14.0 or 0.14.1. + ;;(version "0.14.1") (source (origin (method url-fetch) (uri (pypi-uri "numcodecs" version)) (sha256 (base32 - "1i2rvm1f23dapcf6w3mj4877jzq5f24bhfa0fafbv1nr7xmqr0r2")) + "1g09fwhgmhmw66x5gzmzhm8yhgqki3gpfi0dkhx8z2gh3n43gkx3")) (modules '((guix build utils))) (snippet '(begin @@ -29224,22 +29225,13 @@ tool).") (("os\\.name == 'posix'") (string-append "os.name + platform.machine() == 'posixx86_64' or" " os.name + platform.machine() == 'posixx86'"))) - (delete-file-recursively "c-blosc") - (for-each delete-file '("numcodecs/_shuffle.c" - "numcodecs/blosc.c" - "numcodecs/compat_ext.c" - "numcodecs/lz4.c" - "numcodecs/vlen.c" - "numcodecs/zstd.c")))))) + (delete-file-recursively "c-blosc"))))) (build-system pyproject-build-system) (arguments (list #:test-flags - ;; Tests fail with error: ValueError: setting an array element with a - ;; sequence. The requested array has an inhomogeneous shape after 1 - ;; dimensions. The detected shape was (3,) + inhomogeneous part. - #~(list "--deselect=numcodecs/tests/test_json.py::test_non_numpy_inputs" - "--deselect=numcodecs/tests/test_msgpacks.py::test_non_numpy_inputs") + ;; zarr isn't available, because it dependes on this package. + '(list "-k" "not test_zarr3_import") #:phases '(modify-phases %standard-phases (add-after 'unpack 'disable-avx2 @@ -29266,13 +29258,23 @@ tool).") (list c-blosc lz4 zlib `(,zstd "lib"))) (propagated-inputs - (list python-entrypoints - python-numpy + (list python-coverage + python-google-crc32c + python-importlib-metadata python-msgpack - python-typing-extensions)) + python-numpy + python-numpydoc)) (native-inputs - (list python-cython python-pytest python-setuptools-scm - python-setuptools python-wheel)) + (list python-cython + python-py-cpuinfo + python-pydata-sphinx-theme + python-pytest + python-pytest-cov + python-setuptools + python-setuptools-scm ;for correct version + python-sphinx + python-sphinx-issues + python-wheel)) (home-page "https://github.com/zarr-developers/numcodecs") (synopsis "Buffer compression and transformation codecs") (description |