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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2023-11-30 13:20:05 +0100
committerRicardo Wurmus <rekado@elephly.net>2023-12-11 06:27:42 +0100
commit9535cee6cdf259f898fae043564038f53a809a9e (patch)
tree9520748dadc28100bf56e63a15bc4547ce845f35
parent65334547674bdaeb75eb37ffbe23ba6f9fd486b1 (diff)
downloadguix-9535cee6cdf259f898fae043564038f53a809a9e.tar.gz
guix-9535cee6cdf259f898fae043564038f53a809a9e.zip
gnu: Add r-polyester.
* gnu/packages/bioconductor.scm (r-polyester): New variable. Change-Id: I415089cda3214ec04402fc6f4505fa868414d0e2 Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
-rw-r--r--gnu/packages/bioconductor.scm28
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7ff364ee55..4f15213481 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9592,6 +9592,34 @@ package contains functions for combining the results of multiple runs of gene
set analyses.")
(license license:gpl2+)))
+(define-public r-polyester
+ (package
+ (name "r-polyester")
+ (version "1.38.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "polyester" version))
+ (sha256
+ (base32 "1iycdxj0jhh2faclfzflp2cjc2zmxmhy03avv75h0qg3j5kf35l4"))))
+ (properties `((upstream-name . "polyester")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biostrings
+ r-iranges
+ r-limma
+ r-logspline
+ r-s4vectors
+ r-zlibbioc))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/polyester")
+ (synopsis "Simulate RNA-seq reads")
+ (description
+ "The polyester package simulates RNA-seq reads from differential expression
+experiments with replicates. The reads can then be aligned and used to perform
+comparisons of methods for differential expression.")
+ (license license:artistic2.0)))
+
(define-public r-powertcr
(package
(name "r-powertcr")