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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 01:50:03 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 09:12:40 +0200 |
| commit | 764e2dba209b3283ebe35a22b49dc4771d42f181 (patch) | |
| tree | bc8bc07c5b0a1c0ff838d4beb60494046645a651 | |
| parent | b9751b629c37c6cd48093e3cbc8bdee63164776c (diff) | |
| download | guix-764e2dba209b3283ebe35a22b49dc4771d42f181.tar.gz guix-764e2dba209b3283ebe35a22b49dc4771d42f181.zip | |
gnu: r-flowworkspace: Update to 4.4.0.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.4.0.
[arguments]: Remove.
[propagated-inputs]: Add r-delayedarray and r-s4vectors.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 17 |
1 files changed, 4 insertions, 13 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 49d39fabd0..b1ccf01485 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9569,27 +9569,16 @@ for other R packages to compile and link against.") (define-public r-flowworkspace (package (name "r-flowworkspace") - (version "4.2.0") + (version "4.4.0") (source (origin (method url-fetch) (uri (bioconductor-uri "flowWorkspace" version)) (sha256 (base32 - "19svh32jq1dpq3ayhpd5r8bw0iax8d9kdvpvc23gx2pf16g1j5ag")))) + "1a9qb2dcvwgb3z0vdbbzn1rzy77d3da72kirs272344hdx9b2cx9")))) (properties `((upstream-name . "flowWorkspace"))) (build-system r-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'fix-linking - (lambda _ - (substitute* "src/Makevars" - ;; This is to avoid having a plain directory on the list of - ;; libraries to link. - (("\\{h5lib\\}" match) - (string-append match "/libhdf5.a"))) - #t))))) (propagated-inputs `(("r-aws-s3" ,r-aws-s3) ("r-aws-signature" ,r-aws-signature) @@ -9598,6 +9587,7 @@ for other R packages to compile and link against.") ("r-biocgenerics" ,r-biocgenerics) ("r-cytolib" ,r-cytolib) ("r-data-table" ,r-data-table) + ("r-delayedarray" ,r-delayedarray) ("r-digest" ,r-digest) ("r-dplyr" ,r-dplyr) ("r-flowcore" ,r-flowcore) @@ -9614,6 +9604,7 @@ for other R packages to compile and link against.") ("r-rgraphviz" ,r-rgraphviz) ("r-rhdf5lib" ,r-rhdf5lib) ("r-rprotobuflib" ,r-rprotobuflib) + ("r-s4vectors" ,r-s4vectors) ("r-scales" ,r-scales) ("r-xml" ,r-xml))) (native-inputs |