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| author | zimoun <zimon.toutoune@gmail.com> | 2020-12-23 19:06:27 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-12-29 17:40:28 +0100 |
| commit | 69a5e066c17452f3ef7843451510ae818184324b (patch) | |
| tree | bbae4e1046e6a3fadb3c469e22d4996c707cedab | |
| parent | 838db0de5e185b49c6d61d5785aaf71e5310c330 (diff) | |
| download | guix-69a5e066c17452f3ef7843451510ae818184324b.tar.gz guix-69a5e066c17452f3ef7843451510ae818184324b.zip | |
gnu: r-gwascat: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-gwascat): Move from here...
* gnu/packages/bioconductor.scm (r-gwascat): ...to here.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 33 | ||||
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 33 |
2 files changed, 33 insertions, 33 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 3dd34e7f24..970602a32b 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9241,6 +9241,39 @@ preprocessing of cytometry data, including i) normalization using bead standards, ii) single-cell deconvolution, and iii) bead-based compensation.") (license license:gpl2+))) +(define-public r-gwascat + (package + (name "r-gwascat") + (version "2.22.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "gwascat" version)) + (sha256 + (base32 + "1aqi1ny93virnzsxkh9ccx3mws70bgv0r8nwgla09vffb7f16nna")))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationdbi" ,r-annotationdbi) + ("r-biocfilecache" ,r-biocfilecache) + ("r-biostrings" ,r-biostrings) + ("r-genomeinfodb" ,r-genomeinfodb) + ("r-genomicfeatures" ,r-genomicfeatures) + ("r-genomicranges" ,r-genomicranges) + ("r-iranges" ,r-iranges) + ("r-readr" ,r-readr) + ("r-s4vectors" ,r-s4vectors) + ("r-snpstats" ,r-snpstats) + ("r-variantannotation" ,r-variantannotation))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://bioconductor.org/packages/gwascat") + (synopsis "Tools for data in the EMBL-EBI GWAS catalog") + (description + "This package provides tools for representing and modeling data in the +EMBL-EBI GWAS catalog.") + (license license:artistic2.0))) + (define-public r-kegggraph (package (name "r-kegggraph") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 6ef93d9b62..ab187dcddd 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10834,39 +10834,6 @@ grid graphics package. This results in genomic information plotted together with your data.") (license license:artistic2.0))) -(define-public r-gwascat - (package - (name "r-gwascat") - (version "2.22.0") - (source - (origin - (method url-fetch) - (uri (bioconductor-uri "gwascat" version)) - (sha256 - (base32 - "1aqi1ny93virnzsxkh9ccx3mws70bgv0r8nwgla09vffb7f16nna")))) - (build-system r-build-system) - (propagated-inputs - `(("r-annotationdbi" ,r-annotationdbi) - ("r-biocfilecache" ,r-biocfilecache) - ("r-biostrings" ,r-biostrings) - ("r-genomeinfodb" ,r-genomeinfodb) - ("r-genomicfeatures" ,r-genomicfeatures) - ("r-genomicranges" ,r-genomicranges) - ("r-iranges" ,r-iranges) - ("r-readr" ,r-readr) - ("r-s4vectors" ,r-s4vectors) - ("r-snpstats" ,r-snpstats) - ("r-variantannotation" ,r-variantannotation))) - (native-inputs - `(("r-knitr" ,r-knitr))) - (home-page "https://bioconductor.org/packages/gwascat") - (synopsis "Tools for data in the EMBL-EBI GWAS catalog") - (description - "This package provides tools for representing and modeling data in the -EMBL-EBI GWAS catalog.") - (license license:artistic2.0))) - (define-public r-dropbead (let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247") (revision "2")) |