| Age | Commit message (Expand) | Author |
|---|
| 2017-02-07 | daemon: Define 'NIX_STORE' before invoking 'guix perform-download'....Reported by rohit yadav <rohityadav@utexas.edu>
at <https://lists.gnu.org/archive/html/guix-devel/2017-02/msg00191.html>.
This fixes a regression whereby 'guix perform-download' would always see
NIX_STORE as unset and thus use "/gnu/store", leading it to miscompute
the hydra.gnu.org content-addressed URLs when the store file name is not
"/gnu/store".
* nix/libstore/builtins.cc (builtinDownload): Add 'setenv' call for
'NIX_STORE'.
| Ludovic Courtès |
| 2017-01-15 | daemon: Client settings no longer override daemon settings....Fixes <http://bugs.gnu.org/20217>.
* nix/libstore/worker-protocol.hh (PROTOCOL_VERSION): Bump to 0x161.
* nix/nix-daemon/nix-daemon.cc (performOp): "build-max-jobs",
"build-max-silent-time", and "build-cores" are no longer read upfront;
instead, read them from the key/value list at the end.
* nix/nix-daemon/guix-daemon.cc (main): Explicitly set
'settings.maxBuildJobs'.
* guix/store.scm (%protocol-version): Bump to #x161.
(set-build-options): #:max-build-jobs, #:max-silent-time, and
#:build-cores now default to #f. Adjust handshake to new protocol.
* tests/store.scm ("build-cores"): New test.
* tests/guix-daemon.sh: Add test for default "build-cores" value.
| Ludovic Courtès |
| 2017-01-11 | daemon: Allow check builds of 'builtin:download' derivations....Fixes <http://bugs.gnu.org/25089>.
Reported by Leo Famulari <leo@famulari.name>.
* nix/libstore/build.cc (DerivationGoal::runChild): In the 'isBuiltin'
case, check whether DRV's output is in 'redirectedOutputs', and pass an
'output' argument to the built-in builder.
(DerivationGoal::addHashRewrite): Add 'printMsg' call.
* nix/libstore/builtins.hh (derivationBuilder): Add 'output' parameter.
* nix/libstore/builtins.cc (builtinDownload): Likewise.
Add OUTPUT to ARGV.
* guix/scripts/perform-download.scm (perform-download): Add 'output'
parameter.
(guix-perform-download): Adjust 'match' clauses accordingly.
* tests/derivations.scm ("'download' built-in builder, check mode"): New
test.
| Ludovic Courtès |
| 2016-12-29 | daemon: Allow fixed-output derivation builds with TMPDIR set....Fixes <http://bugs.gnu.org/25242>.
Reported by Leo Famulari <leo@famulari.name>.
The regression was introduced in 94d92c7796a3dd50c27d532315f7d497ac99f08e.
* nix/libstore/build.cc (DerivationGoal::startBuilder): Set 'useChroot'
as a function 'of isBuiltin(drv)'.
(DerivationGoal::runChild): Use 'useChroot' instead of
'useChroot && !isBuiltin(drv)'.
| Ludovic Courtès |
/gnu/packages/bioconductor.scm?id=63033b159a748935c55df4f12deea4c496544bb8'>gnu/packages/bioconductor.scm@@ -6367,14 +6367,14 @@ sequential way to mimic the manual gating strategy.")
(define-public r-cytoml
(package
(name "r-cytoml")
- (version "2.0.5")
+ (version "2.2.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "CytoML" version))
(sha256
(base32
- "174brv027mm90lydfg6hnhazwh8jy4vf6ial4hpsfalwa5jrz55n"))))
+ "1d8x49aqc95x1vx456hya5r7mal80pj9l6wmr5x5pb5r8qyzz6yq"))))
(properties `((upstream-name . "CytoML")))
(build-system r-build-system)
(inputs
