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authorBen Woodcroft <donttrustben@gmail.com>2016-10-11 22:29:48 +1000
committerBen Woodcroft <donttrustben@gmail.com>2016-10-11 22:29:48 +1000
commit3dd50d974b63cb9c2d934164ac8d8d1b86fa3dc1 (patch)
treef5cfe45c23e6ae501a7a73d0d6da64025ac1a39f
parent99c90561418bc572b096d0961d4e5dc0d6658d45 (diff)
downloadguix-3dd50d974b63cb9c2d934164ac8d8d1b86fa3dc1.tar.gz
guix-3dd50d974b63cb9c2d934164ac8d8d1b86fa3dc1.zip
gnu: vsearch: Update to 2.3.0.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.3.0.
-rw-r--r--gnu/packages/bioinformatics.scm4
1 files changed, 2 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index e313721d95..5fbfdf0b9b 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5594,7 +5594,7 @@ track. The database is exposed as a @code{TxDb} object.")
(define-public vsearch
(package
(name "vsearch")
- (version "2.1.2")
+ (version "2.3.0")
(source
(origin
(method url-fetch)
@@ -5604,7 +5604,7 @@ track. The database is exposed as a @code{TxDb} object.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "1zzfj6ydsfzljyswlwqknpp8s2cf31vimi1aqf9ljsbagjyizc58"))
+ "1r8fk3whkil348y5hfsd4r56qjmchhq4nxm6s7ra5rlisw0mf9fy"))
(modules '((guix build utils)))
(snippet
'(begin
tests/pack.scm: Fix typo in 'test-skip'. Ludovic Courtès 2018-10-19tests: Run 'guix pack' tests using the external store....Fixes <https://bugs.gnu.org/32184>. * guix/tests.scm (call-with-external-store): New procedure. (with-external-store): New macro. * tests/pack.scm (%store): Remove. (test-assertm): Add 'store' parameter. ("self-contained-tarball"): Wrap in 'with-external-store'. * tests/guix-pack.sh: Connect to the external store, if possible, by setting NIX_STORE_DIR and GUIX_DAEMON_SOCKET. Remove most uses of '--bootstrap'. Ludovic Courtès 2018-09-18tests: Skip 'self-contained-tarball' test unconditionally....* tests/pack.scm ("self-contained-tarball"): Skip unconditionally. Ludovic Courtès 2018-06-01pack: Adjust test to expect relative symlinks....Reported by Chris Marusich <cmmarusich@gmail.com>. Fixes <https://bugs.gnu.org/31560>. * tests/pack.scm ("self-contained-tarball"): Rename 'guile' to 'bin'. Expect 'bin/Guile' to be a relative symlink. Ludovic Courtès 2018-06-01tests: Fix arguments in pack test....This is a follow-up to commit 5ffac538aa604b71814ac74579626f0d3110b96e. * tests/pack.scm (self-contained-tarball): Adjust arguments to "self-contained-tarball". Ricardo Wurmus 2017-03-22tests: Skip 'guix pack' test when networking is unavailable....* tests/pack.scm ("self-contained-tarball"): Skip unless (network-reachable?). Ludovic Courtès 2017-03-17pack: Move absolute file name to <compressor>....* guix/scripts/pack.scm (<compressor>)[package]: Remove. [command]: Document as being a gexp with an absolute file name. (%compressors): Adjust accordingly. (self-contained-tarball): Simplify PATH expression. Move 'string-join' for the compressor command on the build side. (docker-image): Simplify PATH expression. * tests/pack.scm (%gzip-compressor): Adjust accordingly. Ludovic Courtès 2017-03-14pack: Add unit test....* guix/scripts/pack.scm (self-contained-tarball): Add #:tar option. [build](tar-supports-sort?): New variable. Use it. * tests/pack.scm: New file. * Makefile.am (SCM_TESTS): Add it. Ludovic Courtès