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authorzimoun <zimon.toutoune@gmail.com>2020-10-30 15:48:42 +0100
committerRicardo Wurmus <rekado@elephly.net>2020-12-09 12:12:22 +0100
commit3dab4570fab4aed88b6e6d01983ebee80a50199b (patch)
tree2fb517d1ea3e45976253826d870ad2436f150397
parentc97bcfbd787926c39805c959997e5081a98547e4 (diff)
downloadguix-3dab4570fab4aed88b6e6d01983ebee80a50199b.tar.gz
guix-3dab4570fab4aed88b6e6d01983ebee80a50199b.zip
gnu: r-glimma: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
-rw-r--r--gnu/packages/bioconductor.scm12
1 files changed, 8 insertions, 4 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 81c0f078fc..16ab91c7b3 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2300,20 +2300,24 @@ defined categories which are over/under represented in RNA-seq data.")
(define-public r-glimma
(package
(name "r-glimma")
- (version "1.16.0")
+ (version "2.0.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Glimma" version))
(sha256
(base32
- "1bxfgwjqb9p400a5a5q6p17kcnl3ddz090llihkfih9kyxii9n4y"))))
+ "0gy30v30lw27frhmw39pzacqzrv2vwj5rsp6gb3yifllrahdiffv"))))
(properties `((upstream-name . "Glimma")))
(build-system r-build-system)
(propagated-inputs
- `(("r-edger" ,r-edger)
+ `(("r-deseq2" ,r-deseq2)
+ ("r-edger" ,r-edger)
+ ("r-htmlwidgets" ,r-htmlwidgets)
("r-jsonlite" ,r-jsonlite)
- ("r-s4vectors" ,r-s4vectors)))
+ ("r-limma" ,r-limma)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/Shians/Glimma")