diff options
author | Ricardo Wurmus <rekado@elephly.net> | 2023-04-28 17:59:52 +0200 |
---|---|---|
committer | Ricardo Wurmus <rekado@elephly.net> | 2023-04-29 20:27:55 +0200 |
commit | 219901a7b26062e9e9a6fb9df1b30aca2e4b778e (patch) | |
tree | 6b462d7a055758bbbbc34ddd4a7bb48364f2a488 | |
parent | 6c700d8b3aba4c7c4a5b98e6b4cc802e5b51bcfb (diff) | |
download | guix-219901a7b26062e9e9a6fb9df1b30aca2e4b778e.tar.gz guix-219901a7b26062e9e9a6fb9df1b30aca2e4b778e.zip |
gnu: r-chipseeker: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.36.0.
[propagated-inputs]: Remove r-ggvenndiagram and r-rcolorbrewer; add r-aplot, r-tibble,
and r-yulab-utils.
-rw-r--r-- | gnu/packages/bioconductor.scm | 11 |
1 files changed, 6 insertions, 5 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 663d6d9b1e..f4ae41ff0e 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -6092,18 +6092,19 @@ regions and to highlight copy number alterations.") (define-public r-chipseeker (package (name "r-chipseeker") - (version "1.34.1") + (version "1.36.0") (source (origin (method url-fetch) (uri (bioconductor-uri "ChIPseeker" version)) (sha256 (base32 - "0jr9mc79di0r3xrc7m27vwk85qa4fpcwp4nb77pr9s6jbv23773r")))) + "0nngygci1g8bb3rsica348zi59hskr6hf8319csia6cman89gvqm")))) (build-system r-build-system) (native-inputs (list r-knitr)) (propagated-inputs (list r-annotationdbi + r-aplot r-biocgenerics r-boot r-enrichplot @@ -6112,17 +6113,17 @@ regions and to highlight copy number alterations.") r-genomicranges r-genomicfeatures r-ggplot2 - r-ggvenndiagram r-gplots r-gtools r-dplyr r-plotrix r-dplyr r-magrittr - r-rcolorbrewer r-rtracklayer r-s4vectors - r-txdb-hsapiens-ucsc-hg19-knowngene)) + r-tibble + r-txdb-hsapiens-ucsc-hg19-knowngene + r-yulab-utils)) (home-page "https://www.bioconductor.org/packages/ChIPseeker/") (synopsis "ChIPseeker for ChIP peak annotation, comparison, and visualization") (description "This package implements functions to retrieve the nearest |