/gnu/tests/

scodecs: Update to 1.5.1....* gnu/packages/bioinformatics.scm (htscodecs): Update to 1.5.1. Efraim Flashner 2023-09-22gnu: wfa2-lib: Mark package as tunable....* gnu/packages/bioinformatics.scm (wfa2-lib)[properties]: New field. Efraim Flashner 2023-09-22gnu: python-bwapy: Fix typo....* gnu/packages/bioinformatics.scm (python-bwapy)[synopsis]: Fix typo. Marius Bakke 2023-09-22gnu: python-arboreto: Add missing inputs....* gnu/packages/bioinformatics.scm (python-arboreto)[propagated-inputs]: Add PYTHON-LZ4 and PYTHON-PYARROW. Marius Bakke 2023-09-20gnu: wfmash: Update to 0.10.5....* gnu/packages/bioinformatics.scm (wfmash): Update to 0.10.5. [source]: Update to changes in source code. [arguments]: Add configure-flag to enable more features. [native-inputs]: Add pkg-config. Efraim Flashner 2023-09-18gnu: python-plastid: Patch it for python 3.10....* gnu/packages/bioinformatics.scm (python-plastid)[arguments]: Add new phase 'patch-for-python-3.10. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu 2023-09-14gnu: perl-cworld-dekker: Drop labels from inputs....* gnu/packages/bioinformatics.scm (perl-cworld-dekker)[arguments]: Use G-expression and avoid references to labeled inputs. [inputs]: Drop labels. Ricardo Wurmus 2023-09-13gnu: python-hicmatrix: Remove custom 'check phase....* gnu/packages/bioinformatics.scm (python-hicmatrix)[arguments]: Remove custom 'check phase. Ricardo Wurmus 2023-09-13gnu: python-hicmatrix: Remove syntax error in setup.py....* gnu/packages/bioinformatics.scm (python-hicmatrix)[arguments]: Add phase remove-invalid-syntax. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu 2023-09-12gnu: Add python-peaks2utr....* gnu/packages/bioinformatics.scm (python-peaks2utr): New variable. Ricardo Wurmus 2023-09-12gnu: macs: Update to 2.2.9.1....* gnu/packages/bioinformatics.scm (macs): Update to 2.2.9.1. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase. [native-inputs]: Move python-cython from here... [inputs]: ...and python-numpy from here... [propagated-inputs]: ...to here. Ricardo Wurmus 2023-09-12gnu: python-cgatcore: Update to 0.6.15....* gnu/packages/bioinformatics.scm (python-cgatcore): Update to 0.6.15. Signed-off-by: Christopher Baines <mail@cbaines.net> Hilton Chain 2023-09-02gnu: r-chromunity: Update to 0.0.2-1.712e56c....* gnu/packages/bioinformatics.scm (r-chromunity): Update to 0.0.2-1.712e56c. [propagated-inputs]: Add r-bsgenome-hsapiens-ucsc-hg38; remove r-skitools. Navid Afkhami