--- a/src/CMakeLists.txt	2021-05-28 13:07:25.655107983 +0200
+++ b/src/CMakeLists.txt	2021-05-28 13:09:55.764025497 +0200
@@ -21,24 +21,6 @@
 
 
 
-### Link HTSlib
-
-ExternalProject_Add(htslib
-    PREFIX ${CMAKE_BINARY_DIR}/htslib
-    GIT_REPOSITORY "https://github.com/samtools/htslib.git"
-    GIT_TAG "1.3.1"
-    UPDATE_COMMAND ""
-    BUILD_IN_SOURCE 1
-    CONFIGURE_COMMAND ""
-    BUILD_COMMAND make
-    INSTALL_COMMAND make install prefix=${CMAKE_BINARY_DIR}/htslib
-    LOG_DOWNLOAD 1
-)
-link_directories (${CMAKE_BINARY_DIR}/htslib/lib)
-include_directories (${CMAKE_BINARY_DIR}/htslib/include)
-
-
-
 ### Set version
 
 # Get the current working branch
@@ -64,13 +46,6 @@
 
 # 2. Boost version from find_package (Boost_VERSION)
 
-# 3. Get HTSlib version from git
-execute_process(
-    COMMAND git describe --always
-    WORKING_DIRECTORY ${PROJECT_BINARY_DIR}/htslib
-    OUTPUT_VARIABLE HTSLIB_VERSION
-    OUTPUT_STRIP_TRAILING_WHITESPACE
-)
 set(HTSLIB_VERSION "1.3.1 ${HTSLIB_VERSION}")
 
 # 4. write version.hpp file
@@ -105,7 +80,6 @@
 add_executable (mosaic main.cpp ${HEADER_FILES})
 target_link_libraries (mosaic LINK_PUBLIC ${Boost_LIBRARIES})
 target_link_libraries (mosaic LINK_PUBLIC hts)
-add_dependencies (mosaic htslib)
 
 
 ### Doxygen API documentation
guix/commit/gnu/machine.scm?id=79878c64b4bda523f50974c3f61b796309b1b8d9'>commit</a><a href='/guix/diff/gnu/machine.scm?id=79878c64b4bda523f50974c3f61b796309b1b8d9'>diff</a></td><td class='form'><form class='right' method='get' action='/guix/log/gnu/machine.scm'>
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<option value='grep'>log msg</option>
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</form>
</td></tr></table>
<div class='path'>path: <a href='/guix/log/?id=79878c64b4bda523f50974c3f61b796309b1b8d9'>root</a>/<a href='/guix/log/gnu?id=79878c64b4bda523f50974c3f61b796309b1b8d9'>gnu</a>/<a href='/guix/log/gnu/machine.scm?id=79878c64b4bda523f50974c3f61b796309b1b8d9'>machine.scm</a></div><div class='content'><table class='list nowrap'><tr class='nohover'><th class='left'>Age</th><th class='left'>Commit message (<a href='/guix/log/gnu/machine.scm?id=79878c64b4bda523f50974c3f61b796309b1b8d9&amp;showmsg=1'>Expand</a>)</th><th class='left'>Author</th></tr>
<tr><td><span title='2020-07-25 19:11:36 +0200'>2020-07-25</span></td><td><a href='/guix/commit/gnu/machine.scm?id=a5e2fc73760a2ae023f2e56bdbf8025971f90e64'>utils: Move &lt;location&gt; and '&amp;error-location' to (guix diagnostics).</a><span class='msg-avail'>...<span class='msg-tooltip'>* guix/utils.scm (&lt;location&gt;, source-properties-&gt;location)
(location-&gt;source-properties, &amp;error-location): Move to...
* guix/diagnostics.scm: ... here.
* gnu.scm: Adjust imports accordingly.
* gnu/machine.scm: Likewise.
* gnu/system.scm: Likewise.
* gnu/tests.scm: Likewise.
* guix/inferior.scm: Likewise.
* tests/channels.scm: Likewise.
* tests/packages.scm: Likewise.
</span></span></td><td>Ludovic Courtès</td></tr>
<tr><td><span title='2020-02-09 23:16:45 +0100'>2020-02-09</span></td><td><a href='/guix/commit/gnu/machine.scm?id=e81344428726f3dae5d2a2e7bb296f46fcde6cc5'>Update e-mail address for Jakob L. Kreuze.</a><span class='msg-avail'>...<span class='msg-tooltip'>As requested here:
&lt;https://lists.gnu.org/archive/html/guix-devel/2020-02/msg00128.html&gt;.

* .mailmap: Add an entry for Jakob.
* gnu/machine.scm, gnu/machine/digital-ocean.scm, gnu/machine/ssh.scm,
gnu/packages/admin.scm, gnu/packages/i2p.scm, gnu/packages/music.scm,
gnu/packages/web.scm, gnu/tests/reconfigure.scm, guix/scripts/deploy.scm,
guix/scripts/system/reconfigure.scm: Update their e-mail address.
</span></span></td><td>Tobias Geerinckx-Rice</td></tr>
<tr><td><span title='2019-12-08 00:47:26 +0100'>2019-12-08</span></td><td><a href='/guix/commit/gnu/machine.scm?id=a1d7920861a8d6c6774149eaf939eb2636942090'>machine: Remove unnecessary record self-referencing bindings.</a><span class='msg-avail'>...<span class='msg-tooltip'>'this-machine' and 'this-machine-ssh-configuration' were useless given
that there are no thunked fields.

* gnu/machine.scm (&lt;machine&gt;)[this-machine]: Remove.
* gnu/machine/ssh.scm (&lt;machine-ssh-configuration&gt;)
[this-machine-ssh-configuration]: Remove.
</span></span></td><td>Ludovic Courtès</td></tr>
<tr><td><span title='2019-12-07 00:59:56 +0100'>2019-12-07</span></td><td><a href='/guix/commit/gnu/machine.scm?id=eaabc5e87f4e48d7bce88ca231f5fc2d554ca3d6'>machine: Add provenance tracking to each machine operating system.</a><span class='msg-avail'>...<span class='msg-tooltip'>* gnu/machine.scm (&lt;machine&gt;): Rename accessor to
'%machine-operating-system'.
(machine-operating-system): New procedure.
* doc/guix.texi (Service Reference): Mention it.
</span></span></td><td>Ludovic Courtès</td></tr>
<tr><td><span title='2019-08-15 07:43:09 -0400'>2019-08-15</span></td><td><a href='/guix/commit/gnu/machine.scm?id=9c70c460a05b2bc60f3f3602f0a2dba0f79ce86c'>machine: Implement 'roll-back-machine'.</a><span class='msg-avail'>...<span class='msg-tooltip'>* gnu/machine.scm (roll-back-machine, &amp;deploy-error, deploy-error?)
(deploy-error-should-roll-back)
(deploy-error-captured-args): New variable.
* gnu/machine/ssh.scm (roll-back-managed-host): New variable.
* guix/scripts/deploy.scm (guix-deploy): Roll-back systems when a
deployment fails.
</span></span></td><td>Jakob L. Kreuze</td></tr>
<tr><td><span title='2019-08-06 15:48:51 -0400'>2019-08-06</span></td><td><a href='/guix/commit/gnu/machine.scm?id=d97ce20400b5d2967bfbc0e9fbfb99bbb2daed4f'>machine: Rename 'system' field.</a><span class='msg-avail'>...<span class='msg-tooltip'>* gnu/machine.scm (machine-system): Delete variable.
(machine-operating-system): New variable.
All callers changed.
* doc/guix.texi (Invoking guix deploy): Use the
'machine-operating-system' accessor rather than 'machine-system'.
</span></span></td><td>Jakob L. Kreuze</td></tr>
<tr><td><span title='2019-07-06 02:10:04 -0400'>2019-07-06</span></td><td><a href='/guix/commit/gnu/machine.scm?id=fa9edf09e992db7510c7471486dffc93e1e707e5'>gnu: Add machine type for deployment specifications.</a><span class='msg-avail'>...<span class='msg-tooltip'>* gnu/machine.scm: New file.
* gnu/machine/ssh.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
</span></span></td><td>Jakob L. Kreuze</td></tr>