;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019 Ricardo Wurmus <rekado@elephly.net>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.

(define-module (gnu packages java-maths)
  #:use-module ((guix licenses) #:prefix license:)
  #:use-module (guix packages)
  #:use-module (guix download)
  #:use-module (guix git-download)
  #:use-module (guix utils)
  #:use-module (guix build-system ant)
  #:use-module (guix build-system gnu)
  #:use-module (gnu packages)
  #:use-module (gnu packages gcc)
  #:use-module (gnu packages java)
  #:use-module (gnu packages maths)
  #:use-module (gnu packages ruby))

(define-public java-jblas
  (package
    (name "java-jblas")
    (version "1.2.4")
    (source (origin
              (method git-fetch)
              (uri (git-reference
                    (url "https://github.com/mikiobraun/jblas")
                    (commit (string-append "jblas-" version))))
              (file-name (git-file-name name version))
              (sha256
               (base32
                "0afh48hq8i8li5z11x415c8slwsfrlib0w1xjfbg186mximqvv3g"))))
    (build-system gnu-build-system)
    (arguments
     `(#:tests? #f                      ; there are none
       #:configure-flags
       (list (string-append "--libpath="
                            (assoc-ref %build-inputs "openblas")
                            "/lib")
             "--build-type=openblas")
       #:phases
       (modify-phases %standard-phases
         (add-after 'unpack 'make-writable
           (lambda _
             (map make-file-writable
                  (find-files "." ".*"))
             #t))
         (add-before 'build 'setenv-JAVA_HOME
           (lambda* (#:key inputs #:allow-other-keys)
             (setenv "JAVA_HOME" (assoc-ref inputs "jdk"))
             #t))
         (add-after 'build 'build-jar
           (lambda* (#:key inputs outputs #:allow-other-keys)
             (setenv "M2_HOME" (assoc-ref outputs "out"))
             (invoke "ant" "jar" (string-append "-Dversion=" ,version))))
         (replace 'install
           (lambda* (#:key outputs #:allow-other-keys)
             (let ((target (string-append (assoc-ref outputs "out")
                                          "/share/java")))
               (mkdir-p target)
               (install-file (string-append "jblas-" ,version ".jar") target))
             #t)))))
    (inputs
     (list openblas))
    (native-inputs
     `(("ant" ,ant)
       ("ruby" ,ruby)                   ; for configure script
       ("gfortran" ,gfortran)
       ("jdk" ,icedtea "jdk")))
    (home-page "http://jblas.org")
    (synopsis "Linear algebra for Java")
    (description
     "jblas is a fast linear algebra library for Java.  jblas is based on BLAS
and LAPACK, the de-facto industry standard for matrix computations, and uses
state-of-the-art implementations for all its computational routines, making
jBLAS very fast.")
    (license license:bsd-3)))
ef='/guix/commit/.gitignore?id=214b77b5e749e2ca5891bfc87f946031cf8934e6'>.gitignore: Ignore .tarball-ignore.</a><span class='msg-avail'>...</span></td><td>Maxim Cournoyer</td></tr>
<tr><td><span title='2021-04-23 23:39:33 -0400'>2021-04-23</span></td><td><a href='/guix/commit/.gitignore?id=8b5339acfe381dca887b38634dcfdecae738ce7b'>.gitignore: Ignore release artifacts.</a><span class='msg-avail'>...</span></td><td>Maxim Cournoyer</td></tr>
<tr><td><span title='2021-04-23 21:32:46 -0400'>2021-04-23</span></td><td><a href='/guix/commit/.gitignore?id=129823c4997c65ad0ee711ab2fcfc91d00e6278c'>.gitignore: Ignore generated .pot files.</a><span class='msg-avail'>...</span></td><td>Maxim Cournoyer</td></tr>
<tr><td><span title='2020-10-20 19:16:21 +0200'>2020-10-20</span></td><td><a href='/guix/commit/.gitignore?id=e6994bff2ef461a2860e4207095746a5565cbf0e'>gitignore: Ignore generated guile binary and intermediate products.</a><span class='msg-avail'>...</span></td><td>Julien Lepiller</td></tr>
<tr><td><span title='2020-09-17 14:10:42 +0200'>2020-09-17</span></td><td><a href='/guix/commit/.gitignore?id=cabac732deffafc796537658a6c33c6c4aec821e'>guix-install.sh: Support OpenRC.</a><span class='msg-avail'>...</span></td><td>Morgan Smith</td></tr>
<tr><td><span title='2020-07-17 15:23:53 +0200'>2020-07-17</span></td><td><a href='/guix/commit/.gitignore?id=d6b05ba3534b030f8de976e340c19ac8a4118ff4'>gitignore: Don't ignore daemon source code.</a><span class='msg-avail'>...</span></td><td>Jakub Kądziołka</td></tr>
<tr><td><span title='2020-06-28 13:28:25 +0200'>2020-06-28</span></td><td><a href='/guix/commit/.gitignore?id=b9edefbc46da76fea6d56e08462618a398192189'>.gitignore: Ignore 'etc/committer.scm'.</a><span class='msg-avail'>...</span></td><td>Brice Waegeneire</td></tr>
<tr><td><span title='2020-05-16 15:37:41 +0200'>2020-05-16</span></td><td><a href='/guix/commit/.gitignore?id=1a1faa78b0498fbb71f1533beb4b65817c1d3f2a'>etc: Add a systemd unit to bind-mount @storedir@ read-only.</a><span class='msg-avail'>...</span></td><td>Tobias Geerinckx-Rice</td></tr>
<tr><td><span title='2020-05-14 23:05:42 -0400'>2020-05-14</span></td><td><a href='/guix/commit/.gitignore?id=cb21ae76714f1873d3b3fb40d5135f00ec104b85'>etc: indent-code.el: Use the --quick option.</a><span class='msg-avail'>...</span></td><td>Maxim Cournoyer</td></tr>
<tr><td><span title='2020-03-30 12:24:55 +0200'>2020-03-30</span></td><td><a href='/guix/commit/.gitignore?id=6e27d1088da07380872f0df9f308b674536cefc8'>.gitignore: Ignore test results in tests/services.</a><span class='msg-avail'>...</span></td><td>Marius Bakke</td></tr>
<tr><td><span title='2020-03-11 02:45:33 +0100'>2020-03-11</span></td><td><a href='/guix/commit/.gitignore?id=73fbe04107d38f4561636c74d28d7a4935cbb1ef'>Add system start-up files for guix-daemon.</a><span class='msg-avail'>...</span></td><td>Danny Milosavljevic</td></tr>