From 79b555edeb469b4d92ef31b66d9b5961001e1a68 Mon Sep 17 00:00:00 2001
From: Ben Woodcroft <donttrustben@gmail.com>
Date: Sun, 24 Apr 2016 09:45:07 +1000
Subject: gnu: samtools: Update to 1.3.1.

* gnu/packages/bioinformatics.scm (samtools): Update to 1.3.1.
---
 gnu/packages/bioinformatics.scm | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

(limited to 'gnu')

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index c49b0a9e17..899ce1ca0c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2902,7 +2902,7 @@ distribution, coverage uniformity, strand specificity, etc.")
 (define-public samtools
   (package
     (name "samtools")
-    (version "1.3")
+    (version "1.3.1")
     (source
      (origin
        (method url-fetch)
@@ -2911,7 +2911,7 @@ distribution, coverage uniformity, strand specificity, etc.")
                        version "/samtools-" version ".tar.bz2"))
        (sha256
         (base32
-         "03mnf0mhbfwhqlqfslrhfnw68s3g0fs1as354i9a584mqw1l1smy"))))
+         "0znnnxc467jbf1as2dpskrjhfh8mbll760j6w6rdkwlwbqsp8gbc"))))
     (build-system gnu-build-system)
     (arguments
      `(#:modules ((ice-9 ftw)
-- 
cgit v1.2.3

><a href='/guix/refs/?id=2b276ae80feadda01d58eb13bb72b96cd0d9c998'>refs</a><a class='active' href='/guix/log/tests/store-deduplication.scm'>log</a><a href='/guix/tree/tests/store-deduplication.scm?id=2b276ae80feadda01d58eb13bb72b96cd0d9c998'>tree</a><a href='/guix/commit/tests/store-deduplication.scm?id=2b276ae80feadda01d58eb13bb72b96cd0d9c998'>commit</a><a href='/guix/diff/tests/store-deduplication.scm?id=2b276ae80feadda01d58eb13bb72b96cd0d9c998'>diff</a></td><td class='form'><form class='right' method='get' action='/guix/log/tests/store-deduplication.scm'>
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<div class='path'>path: <a href='/guix/log/?id=2b276ae80feadda01d58eb13bb72b96cd0d9c998'>root</a>/<a href='/guix/log/tests?id=2b276ae80feadda01d58eb13bb72b96cd0d9c998'>tests</a>/<a href='/guix/log/tests/store-deduplication.scm?id=2b276ae80feadda01d58eb13bb72b96cd0d9c998'>store-deduplication.scm</a></div><div class='content'><table class='list nowrap'><tr class='nohover'><th class='left'>Age</th><th class='left'>Commit message (<a href='/guix/log/tests/store-deduplication.scm?id=2b276ae80feadda01d58eb13bb72b96cd0d9c998&amp;showmsg=1'>Expand</a>)</th><th class='left'>Author</th></tr>
<tr><td><span title='2024-05-25 16:44:42 +0200'>2024-05-25</span></td><td><a href='/guix/commit/tests/store-deduplication.scm?id=5a7cb59648d102168bd4ecd16f36b69e0f594be1'>deduplication: Detect holes and create sparse files.</a><span class='msg-avail'>...</span></td><td>Ludovic Courtès</td></tr>
<tr><td><span title='2022-12-10 10:56:48 +0100'>2022-12-10</span></td><td><a href='/guix/commit/tests/store-deduplication.scm?id=b129026e2e242e9068158ae6e6fcd8d7c5ea092e'>deduplicate: Use 'sendfile' for small file copies.</a><span class='msg-avail'>...</span></td><td>Ludovic Courtès</td></tr>
<tr><td><span title='2021-11-16 14:34:28 +0100'>2021-11-16</span></td><td><a href='/guix/commit/tests/store-deduplication.scm?id=472a0e82a52a3d5d841e1dfad6b13e26082a5750'>daemon: Do not deduplicate files smaller than 8 KiB.</a><span class='msg-avail'>...</span></td><td>Ludovic Courtès</td></tr>