From 3414ce98765bb0f58507418bfb9fa68bded06591 Mon Sep 17 00:00:00 2001
From: Kyle Meyer <kyle@kyleam.com>
Date: Thu, 26 Oct 2017 17:02:30 -0400
Subject: gnu: snakemake: Update to 4.2.0.

* gnu/packages/python.scm (snakemake): Update to 4.2.0.
[propagated-inputs]: Add python-appdirs, python-configargparse, python-pyyaml,
and python-ratelimiter, which are dependencies as of Snakemake 4.1.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
---
 gnu/packages/python.scm | 10 +++++++---
 1 file changed, 7 insertions(+), 3 deletions(-)

(limited to 'gnu')

diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index fed7394d78..e8a7339199 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -6626,13 +6626,13 @@ of the structure, dynamics, and functions of complex networks.")
 (define-public snakemake
   (package
     (name "snakemake")
-    (version "3.13.3")
+    (version "4.2.0")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "snakemake" version))
        (sha256
-        (base32 "1nixb944r4hlskwkzc4wjs34b40xpxpw9gmhhm5p09gvmm22ap5d"))))
+        (base32 "0mgl44q152ws40zj2vicqark5szyd73vqy9pf26g6hk6dk0y0c79"))))
     (build-system python-build-system)
     (arguments
      ;; TODO: Package missing test dependencies.
@@ -6651,7 +6651,11 @@ of the structure, dynamics, and functions of complex networks.")
              #t)))))
     (propagated-inputs
      `(("python-wrapt" ,python-wrapt)
-       ("python-requests" ,python-requests)))
+       ("python-requests" ,python-requests)
+       ("python-appdirs" ,python-appdirs)
+       ("python-configargparse" ,python-configargparse)
+       ("python-pyyaml" ,python-pyyaml)
+       ("python-ratelimiter" ,python-ratelimiter)))
     (home-page "https://bitbucket.org/snakemake/snakemake/wiki/Home")
     (synopsis "Python-based execution environment for make-like workflows")
     (description
-- 
cgit v1.2.3

ption>
<option value='committer'>committer</option>
<option value='range'>range</option>
</select>
<input class='txt' type='search' size='10' name='q' value=''/>
<input type='submit' value='search'/>
</form>
</td></tr></table>
<div class='path'>path: <a href='/guix/log/?id=cba1dc68dae5660b2f85d135608926499aafb85b'>root</a>/<a href='/guix/log/gnu?id=cba1dc68dae5660b2f85d135608926499aafb85b'>gnu</a>/<a href='/guix/log/gnu/packages?id=cba1dc68dae5660b2f85d135608926499aafb85b'>packages</a>/<a href='/guix/log/gnu/packages/dejagnu.scm?id=cba1dc68dae5660b2f85d135608926499aafb85b'>dejagnu.scm</a></div><div class='content'><table class='list nowrap'><tr class='nohover'><th class='left'>Age</th><th class='left'>Commit message (<a href='/guix/log/gnu/packages/dejagnu.scm?id=cba1dc68dae5660b2f85d135608926499aafb85b&amp;showmsg=1'>Expand</a>)</th><th class='left'>Author</th></tr>
<tr><td><span title='2018-03-23 04:41:35 -0400'>2018-03-23</span></td><td><a href='/guix/commit/gnu/packages/dejagnu.scm?id=f97cb24967c2787034c3d9a5fce2cf4c1b0c0b3a'>gnu: dejagnu: Return #t from all phases.</a><span class='msg-avail'>...</span></td><td>Mark H Weaver</td></tr>
<tr><td><span title='2017-11-02 13:12:15 +0200'>2017-11-02</span></td><td><a href='/guix/commit/gnu/packages/dejagnu.scm?id=30ee6bf5d2806164de417fb44dbb6eb342e1f6d3'>gnu: dejagnu: Update to 1.6.1.</a><span class='msg-avail'>...</span></td><td>Efraim Flashner</td></tr>