From 3132fcf7f8e9dda748e3e395c83adfc1de70e52e Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Wed, 19 Jul 2023 15:13:42 +0200 Subject: gnu: Add r-globalancova. * gnu/packages/bioconductor.scm (r-globalancova): New variable. --- gnu/packages/bioconductor.scm | 32 ++++++++++++++++++++++++++++++++ 1 file changed, 32 insertions(+) (limited to 'gnu') diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1cef5bb0d5..e46a9175fa 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -7157,6 +7157,38 @@ profiles and assignment of a status (gain, normal or loss) to each chromosomal regions identified.") (license license:gpl2))) +(define-public r-globalancova + (package + (name "r-globalancova") + (version "4.18.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "GlobalAncova" version)) + (sha256 + (base32 + "1fld18rmi6rqm2nr549a4740w1iq3mf5df67v9ba6h42r4abs1ar")))) + (properties `((upstream-name . "GlobalAncova"))) + (build-system r-build-system) + (propagated-inputs (list r-annotate + r-annotationdbi + r-biobase + r-corpcor + r-dendextend + r-globaltest + r-gseabase + r-vgam)) + (home-page "https://bioconductor.org/packages/GlobalAncova") + (synopsis "Global test for groups of variables via model comparisons") + (description + "This package supports the computation of an F-test for the association +between expression values and clinical entities. In many cases a two way +layout with gene and a dichotomous group as factors will be considered. +However, adjustment for other covariates and the analysis of arbitrary +clinical variables, interactions, gene co-expression, time series data and so +on is also possible. The test is carried out by comparison of corresponding +linear models via the extra sum of squares principle.") + (license license:gpl2+))) + (define-public r-globaltest (package (name "r-globaltest") -- cgit v1.2.3