From ba53681a469aad12235652ecfd8693bc77d2435c Mon Sep 17 00:00:00 2001
From: zimoun <zimon.toutoune@gmail.com>
Date: Fri, 30 Oct 2020 15:52:47 +0100
Subject: gnu: r-widgettools: Update to 1.68.0.

* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.68.0.
---
 gnu/packages/bioconductor.scm | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

(limited to 'gnu/packages/bioconductor.scm')

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 39d8998b72..2496ff36ab 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -5267,14 +5267,14 @@ visualization of exonic read coverage.")
 (define-public r-widgettools
   (package
     (name "r-widgettools")
-    (version "1.66.0")
+    (version "1.68.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "widgetTools" version))
        (sha256
         (base32
-         "0lrdpsgm9r7yfyyj5crvb7px4hrghxhmiic4iissz40slbfyvilx"))))
+         "172f0pmsspd9lss557cmxzjfsbansimjyhwdiahg8pqrayhwvf2w"))))
     (properties `((upstream-name . "widgetTools")))
     (build-system r-build-system)
     (home-page "https://bioconductor.org/packages/widgetTools/")
-- 
cgit v1.2.3

guix/refs/?id=907590b67139f18dd33dab3f9bee29b9a08c6829'>refs</a><a class='active' href='/guix/log/tests/services/configuration.scm'>log</a><a href='/guix/tree/tests/services/configuration.scm?id=907590b67139f18dd33dab3f9bee29b9a08c6829'>tree</a><a href='/guix/commit/tests/services/configuration.scm?id=907590b67139f18dd33dab3f9bee29b9a08c6829'>commit</a><a href='/guix/diff/tests/services/configuration.scm?id=907590b67139f18dd33dab3f9bee29b9a08c6829'>diff</a></td><td class='form'><form class='right' method='get' action='/guix/log/tests/services/configuration.scm'>
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<div class='path'>path: <a href='/guix/log/?id=907590b67139f18dd33dab3f9bee29b9a08c6829'>root</a>/<a href='/guix/log/tests?id=907590b67139f18dd33dab3f9bee29b9a08c6829'>tests</a>/<a href='/guix/log/tests/services?id=907590b67139f18dd33dab3f9bee29b9a08c6829'>services</a>/<a href='/guix/log/tests/services/configuration.scm?id=907590b67139f18dd33dab3f9bee29b9a08c6829'>configuration.scm</a></div><div class='content'><table class='list nowrap'><tr class='nohover'><th class='left'>Age</th><th class='left'>Commit message (<a href='/guix/log/tests/services/configuration.scm?id=907590b67139f18dd33dab3f9bee29b9a08c6829&amp;showmsg=1'>Expand</a>)</th><th class='left'>Author</th></tr>
<tr><td><span title='2023-10-07 12:41:05 -0400'>2023-10-07</span></td><td><a href='/guix/commit/tests/services/configuration.scm?id=a7994ed58dc1ac3b57aa2df8508f05fd0748b3e0'>services: configuration: Use transducers within serialize-configuration.</a><span class='msg-avail'>...<span class='msg-tooltip'>Introduces 'base-transducer', a SRFI-171 based transducer that can be used as a
starting point for writing custom configuration record serializing procedures.

This also fixes the symbol maybe-value serialization test case.

* gnu/services/configuration.scm (empty-serializer?): New predicate.
(base-transducer, tfilter-maybe-value): New procedure.
(serialize-configuration): Adapt to use base-transducer.

* gnu/services/telephony.scm (jami-account-&gt;alist): Use transducers to skip
fields that are unserializable or whose field maybe-value is unset.

* tests/services/configuration.scm: Remove test-expect-fail.

Signed-off-by: Maxim Cournoyer &lt;maxim.cournoyer@gmail.com&gt;
</span></span></td><td>Bruno Victal</td></tr>
<tr><td><span title='2023-04-02 12:35:30 +0200'>2023-04-02</span></td><td><a href='/guix/commit/tests/services/configuration.scm?id=0fbb356714f4ae3ea18e4997131a0e1746cc923c'>services: replace bare serializers with (serializer ...)</a><span class='msg-avail'>...<span class='msg-tooltip'>* gnu/home/services/shells.scm
(home-zsh-configuration)[environment-variables]: Use (serializer ...).
(home-bash-configuration)[aliases, environment-variables]: Likewise.
(home-fish-configuration)[abbreviations, aliases]
[environment-variables]: Likewise.
* gnu/services/audio.scm (mpd-configuration)[music-dir, playlist-dir]
[endpoints, address, inputs, archive-plugins, input-cache-size]
[decoders, filters, playlist-plugins]: Likewise.
* gnu/services/linux.scm (fstrim-configuration)[extra-arguments]:
Likewise.
* gnu/services/security.scm (fail2ban-jail-configuration)[backend]
[log-encoding, extra-content]: Likewise.
* tests/services/configuration.scm: Update tests.
("serialize-configuration [deprecated]"): New test.

Signed-off-by: Liliana Marie Prikler &lt;liliana.prikler@gmail.com&gt;
</span></span></td><td>Bruno Victal</td></tr>
<tr><td><span title='2023-04-02 12:31:51 +0200'>2023-04-02</span></td><td><a href='/guix/commit/tests/services/configuration.scm?id=6f48efa9b89f3c33f7b2827cae88e87ec64faa09'>services: configuration: Add user-defined sanitizer support.</a><span class='msg-avail'>...<span class='msg-tooltip'>This changes the 'custom-serializer' field into a generic
'extra-args' field that can be extended to support new literals.
Within extra-args, the literals 'sanitizer' and 'serializer' allow
for user-defined sanitization and serialization procedures respectively.
The 'empty-serializer' was also added as a literal to be used as before.

To prevent confusion between the new “explicit” style of specifying
a sanitizer, and the old “implicit” style, the latter has been
deprecated, and a warning is issued if it is encountered.

* gnu/services/configuration.scm (define-configuration-helper):
Rename 'custom-serializer' to 'extra-args'.  Add support for literals
'sanitizer', 'serializer' and 'empty-serializer'.  Rename procedure
'field-sanitizer' to 'default-field-sanitizer' to avoid syntax clash.
Only define default field sanitizers if user-defined ones are absent.
(normalize-extra-args): New variable.
(&lt;configuration-field&gt;)[sanitizer]: New field.
* doc/guix.texi (Complex Configurations): Document the newly added
literals.
* tests/services/configuration.scm: Add tests for the new literals.

Signed-off-by: Liliana Marie Prikler &lt;liliana.prikler@gmail.com&gt;
</span></span></td><td>Bruno Victal</td></tr>