From e44c4cd73cfb256c97a0f14f8b3731b35b024dd8 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Fri, 13 Dec 2019 13:30:58 +0100 Subject: gnu: Add r-bio3d. * gnu/packages/cran.scm (r-bio3d): New variable. --- gnu/packages/cran.scm | 31 +++++++++++++++++++++++++++++++ 1 file changed, 31 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index c2f0e156bd..1c3d40d76c 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -16013,3 +16013,34 @@ graphics directly in the terminal window. This package provides a basic plotting function (and equivalents of curve, density, acf and barplot) as well as a boxplot function.") (license license:lgpl3+))) + +(define-public r-bio3d + (package + (name "r-bio3d") + (version "2.4-0") + (source + (origin + (method url-fetch) + (uri (cran-uri "bio3d" version)) + (sha256 + (base32 + "0ikpk1ppdp50m9kd289z616i382j9i7ji1zchyd4xqfyk8lnxf4s")))) + (properties `((upstream-name . "bio3d"))) + (build-system r-build-system) + (inputs `(("zlib" ,zlib))) + (propagated-inputs `(("r-rcpp" ,r-rcpp))) + (home-page "http://thegrantlab.org/bio3d/") + (synopsis "Biological structure analysis") + (description + "This package provides utilities to process, organize and explore protein +structure, sequence and dynamics data. Features include the ability to read +and write structure, sequence and dynamic trajectory data, perform sequence +and structure database searches, data summaries, atom selection, alignment, +superposition, rigid core identification, clustering, torsion analysis, +distance matrix analysis, structure and sequence conservation analysis, normal +mode analysis, principal component analysis of heterogeneous structure data, +and correlation network analysis from normal mode and molecular dynamics data. +In addition, various utility functions are provided to enable the statistical +and graphical power of the R environment to work with biological sequence and +structural data.") + (license license:gpl2+))) -- cgit v1.2.3