From cf1d581464645b3f96ead827010f84ef7d714506 Mon Sep 17 00:00:00 2001 From: Ben Woodcroft Date: Thu, 30 Mar 2017 16:02:08 +1000 Subject: gnu: khmer: Build with gcc-4. * gnu/packages/bioinformatics.scm (khmer)[inputs]: Add gcc-4.9. --- gnu/packages/bioinformatics.scm | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 3c0366814b..7c21586fcf 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3150,7 +3150,10 @@ command, or queried for specific k-mers with @code{jellyfish query}.") `(("zlib" ,zlib) ("bzip2" ,bzip2) ("python-screed" ,python-screed) - ("python-bz2file" ,python-bz2file))) + ("python-bz2file" ,python-bz2file) + ;; Tests fail when gcc-5 is used for compilation. Use gcc-4.9 at least + ;; until the next version of khmer (likely 2.1) is released. + ("gcc" ,gcc-4.9))) (home-page "https://khmer.readthedocs.org/") (synopsis "K-mer counting, filtering and graph traversal library") (description "The khmer software is a set of command-line tools for -- cgit v1.2.3