From 6bcc2f6571a632c4baaa47b5fc0fd2943b721f24 Mon Sep 17 00:00:00 2001 From: Maxim Cournoyer Date: Fri, 20 Oct 2023 01:05:23 -0400 Subject: gnu: mafft: Add bash-minimal to inputs. * gnu/packages/bioinformatics.scm (mafft): Delete trailing #t. [inputs]: Add bash-minimal. Change-Id: Id30d22dc37ee57591f17dc116de81500b09adf3c --- gnu/packages/bioinformatics.scm | 8 +++----- 1 file changed, 3 insertions(+), 5 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f62f83c221..5797993500 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8810,8 +8810,7 @@ selection, etc.).") (("^rm -f mafft-distance mafft-distance.exe") ")#") ;; do not install MAN pages in libexec folder (("^\t\\$\\(INSTALL\\) -m 644 \\$\\(MANPAGES\\) \ -\\$\\(DESTDIR\\)\\$\\(LIBDIR\\)") "#")) - #t)) +\\$\\(DESTDIR\\)\\$\\(LIBDIR\\)") "#")))) (add-after 'enter-dir 'patch-paths (lambda* (#:key inputs #:allow-other-keys) (substitute* '("pairash.c" @@ -8819,8 +8818,7 @@ selection, etc.).") (("perl") (which "perl")) (("([\"`| ])awk" _ prefix) (string-append prefix (which "awk"))) - (("grep") (which "grep"))) - #t)) + (("grep") (which "grep"))))) (delete 'configure) (add-after 'install 'wrap-programs (lambda* (#:key inputs outputs #:allow-other-keys) @@ -8833,7 +8831,7 @@ selection, etc.).") `("PATH" ":" prefix (,path)))) (find-files bin)))))))) (inputs - (list perl ruby gawk grep coreutils)) + (list bash-minimal perl ruby gawk grep coreutils)) (home-page "https://mafft.cbrc.jp/alignment/software/") (synopsis "Multiple sequence alignment program") (description -- cgit v1.2.3