From 278e1c090e8b567169934de293649abf268eae53 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Mon, 21 Jun 2021 17:51:27 +0200
Subject: gnu: Add r-residualmatrix.

* gnu/packages/bioconductor.scm (r-residualmatrix): New variable.
---
 gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++
 1 file changed, 31 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 6845894e97..1d4a033038 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6205,6 +6205,37 @@ classification (assignment) methods.  It also contains a Shiny application for
 interactive exploration of results.")
     (license license:gpl2+)))
 
+(define-public r-residualmatrix
+  (package
+    (name "r-residualmatrix")
+    (version "1.2.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "ResidualMatrix" version))
+       (sha256
+        (base32
+         "0p7va19aw0j6anx7ck879kbi5cn7dy712h5ia94adr38ssismv1v"))))
+    (properties
+     `((upstream-name . "ResidualMatrix")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-delayedarray" ,r-delayedarray)
+       ("r-matrix" ,r-matrix)
+       ("r-s4vectors" ,r-s4vectors)))
+    (native-inputs
+     `(("r-knitr" ,r-knitr)))
+    (home-page "https://github.com/LTLA/ResidualMatrix")
+    (synopsis "Create a DelayedMatrix of regression residuals")
+    (description
+     "This package implements tools for delayed computation of a matrix of
+residuals after fitting a linear model to each column of an input matrix.  It
+also supports partial computation of residuals where selected factors are to
+be preserved in the output matrix.  It implements a number of efficient
+methods for operating on the delayed matrix of residuals, most notably matrix
+multiplication and calculation of row/column sums or means.")
+    (license license:gpl3)))
+
 (define-public r-mast
   (package
     (name "r-mast")
-- 
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</table><div class='diffstat-summary'>1 files changed, 2 insertions, 2 deletions</div><table summary='diff' class='diff'><tr><td><div class='head'>diff --git a/gnu/packages/tls.scm b/gnu/packages/tls.scm<br/>index 17dcb407ac..6b131657f9 100644<br/>--- a/<a href='/guix/tree/gnu/packages/tls.scm?id=82e7a51ccdd901ef5b28a5f0f3b12f5ead0688f1'>gnu/packages/tls.scm</a><br/>+++ b/<a href='/guix/tree/gnu/packages/tls.scm?id=2833756643674ac11bad8ffc3086988b623a4391'>gnu/packages/tls.scm</a></div><div class='hunk'>@@ -413,7 +413,7 @@ required structures.")</div><div class='ctx'>   (package</div><div class='ctx'>     (inherit openssl)</div><div class='ctx'>     (name "openssl")</div><div class='del'>-    (version "1.1.1a")</div><div class='add'>+    (version "1.1.1b")</div><div class='ctx'>     (source (origin</div><div class='ctx'>              (method url-fetch)</div><div class='ctx'>              (uri (list (string-append "https://www.openssl.org/source/openssl-"</div><div class='hunk'>@@ -426,7 +426,7 @@ required structures.")</div><div class='ctx'>               (patches (search-patches "openssl-1.1-c-rehash-in.patch"))</div><div class='ctx'>               (sha256</div><div class='ctx'>                (base32</div><div class='del'>-                "0hcz7znzznbibpy3iyyhvlqrq44y88plxwdj32wjzgbwic7i687w"))))</div><div class='add'>+                "0jza8cmznnyiia43056dij1jdmz62dx17wsn0zxksh9h6817nmaw"))))</div><div class='ctx'>     (outputs '("out"</div><div class='ctx'>                "doc"        ; 6.8 MiB of man3 pages and full HTML documentation</div><div class='ctx'>                "static"))   ; 6.4 MiB of .a files</div></td></tr></table></div> <!-- class=content -->
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