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2024-01-25gnu: r-bayesfactor: Update to 0.9.12-4.7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-bayesfactor): Update to 0.9.12-4.7. Change-Id: I946e370397d5ca7d58f9b61fd2aaebe988ece43c
2024-01-25gnu: r-cowplot: Update to 1.1.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-cowplot): Update to 1.1.3. Change-Id: I06bc9f67a9911ef927d31f7d33b4e59c2f25e02b
2024-01-25gnu: r-r-oo: Update to 1.26.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-oo): Update to 1.26.0. Change-Id: Ic85ada2a8f72202641cfc75f73344c23bc7d152a
2024-01-25gnu: r-segmented: Update to 2.0-2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-segmented): Update to 2.0-2. Change-Id: I4753d69bf5c38fec7d37acb3b214652de4be3d0c
2024-01-25gnu: r-ggh4x: Update to 0.2.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggh4x): Update to 0.2.8. Change-Id: I9757f1168761b5f9d820ba43bfffcea7d4979e66
2024-01-25gnu: r-consrank: Update to 2.1.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-consrank): Update to 2.1.4. Change-Id: Icf447178150fe8bd2d8c9cce344ef7cebc080c14
2024-01-25gnu: r-directlabels: Update to 2024.1.21.Ricardo Wurmus
* gnu/packages/cran.scm (r-directlabels): Update to 2024.1.21. Change-Id: I4efad0c947bf02083459653e800b68e8a26acbbf
2024-01-25gnu: r-rainbow: Update to 3.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-rainbow): Update to 3.8. Change-Id: Ice3e294dd35979a1e7b0bb0cdfbd116d6023f0e2
2024-01-25gnu: r-r-filesets: Update to 2.15.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-r-filesets): Update to 2.15.1. Change-Id: I65b0ead73e5c0b48eb4717d7a35796a5f6ca0c5f
2024-01-25gnu: r-r-huge: Update to 0.10.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-r-huge): Update to 0.10.1. Change-Id: Ia7a7cceefd816a36fd8c33866e379c5780088c42
2024-01-25gnu: r-kableextra: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-kableextra): Update to 1.4.0. [propagated-inputs]: Remove r-glue, r-rvest, and r-webshot. Change-Id: I54ae752da0b802b0f322c8762d73c3d1519103ee
2024-01-25gnu: r-rcppannoy: Update to 0.0.22.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.22. Change-Id: I87fde0568881276bec612ae99e95ea5c9c70a3f0
2024-01-25gnu: r-emmeans: Update to 1.10.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-emmeans): Update to 1.10.0. Change-Id: I32a041b81e528b8b07068f748a7b9f8186a34a89
2024-01-25gnu: r-ggridges: Update to 0.5.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggridges): Update to 0.5.6. Change-Id: Ic0c746f31294f8a4e9668eff6ae7d02c27f64f1c
2024-01-25gnu: r-conos: Update to 1.5.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-conos): Update to 1.5.1. Change-Id: If05dea04f6abb3c78504ab46aa052aeb288a7c8c
2024-01-25gnu: r-tidyr: Update to 1.3.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tidyr): Update to 1.3.1. Change-Id: I4b97cbcaad562070440d692a1a5652eb15123516
2024-01-24gnu: python-opentsne: Update to 1.0.1.Vinicius Monego
* gnu/packages/machine-learning.scm (python-opentsne): Update to 1.0.1. Change-Id: Ic71c3622e9408a21c5bade00228a9af5320c6dce
2024-01-24gnu: python-pymc: Update to 5.10.3.Vinicius Monego
* gnu/packages/statistics.scm (python-pymc): Update to 5.10.3. Change-Id: I7c30e5a487f97415ef3bf7f9c514a5de54dcd611
2024-01-24gnu: python-arviz: Update to 0.17.0.Vinicius Monego
* gnu/packages/statistics.scm (python-arviz): Update to 0.17.0. Change-Id: I93112c570010165c888b5e303a3c82d80cda3016
2024-01-24gnu: python-xarray-einstats: Update to 0.7.0.Vinicius Monego
* gnu/packages/python-science.scm (python-xarray-einstats): Update to 0.7.0. Change-Id: Iddd1fca8c37f05a928d20b90f9f95814f31435b2
2024-01-24gnu: python-scikit-rf: Update to 0.31.0.Vinicius Monego
* gnu/packages/engineering.scm (python-scikit-rf): Update to 0.31.0. Change-Id: I5dc8891530d7a7e55a899cfde4f72aecc83ec044
2024-01-24gnu: guile-fibers: Disable failing tests on aarch64.Roman Scherer
* gnu/packages/guile-xyz.scm (guile-fibers)[arguments]: In ‘disable-some-tests’ phase, disable failing tests on aarch64. Change-Id: Id05b516a659f641cc7ef01efdaf6cd1f2c735800 Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2024-01-24services: cuirass: Depend on ‘user-processes’.Ludovic Courtès
* gnu/services/cuirass.scm (cuirass-shepherd-service) (cuirass-remote-worker-shepherd-service): Add ‘user-processes’ to the ‘requirement’ field. Change-Id: Iba087bfd8aaa9b1ef54bcc77d855adc136e18644
2024-01-24services: cuirass: Add ‘configuration’ action.Ludovic Courtès
* gnu/services/cuirass.scm (cuirass-shepherd-service): Add ‘actions’ field to ‘cuirass’ Shepherd service. Change-Id: I7feaeebcb89fcd9a1fdbc63f0337e0d63b697793
2024-01-24gnu: libnova: Use G-Expressions.Sharlatan Hellseher
* gnu/packages/astronomy.scm (libnova): Adjust package style by applying G-Expressions and fix indention. [arguments]<#:phases>: Remove trailing #f from lambda. Change-Id: I63d239464fd3cb166449ef8904b5fd72326cb853
2024-01-24gnu: stackistry: Use G-Expressions.Sharlatan Hellseher
* gnu/packages/astronomy.scm (stackistry): Update package style by using G-Expressions. Apply indention. [arguments]<#:tests?>: Use it instead of deleting check phase. <#:phases>: Remove trailing #f from each lambda. Change-Id: I30f3906719713f0d47dc2049564bc2691ba3cd5d
2024-01-24gnu: libpasastro: Use G-Expressions.Sharlatan Hellseher
* gnu/packages/astronomy.scm (libpasastro): [supported-systems]: Add it. [arguments]: Rewrite using G-expressions. [description]: Remove trailing \n. Change-Id: Ic0e79394be1110566f5481963fdd167985c1a770
2024-01-24gnu: python-stsynphot: Fix build.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-stsynphot): Fix build. [native-inputs]: Add python-semantic-version. Change-Id: I72b086c6a0461293c2191e39e25b3c803279bf60
2024-01-24gnu: python-skyfield: Update to 1.47.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-skyfield): Update to 1.47. [inputs]: Remove python-certifi, python-jplephem, python-numpy, and python-sgp4. [propagated-inputs]: Add python-certifi, python-jplephem, python-numpy, and python-sgp4. Change-Id: If5a9a47077edcebe83449c4c54a49189dea61c5a
2024-01-24gnu: python-tweakwcs: Update to 0.8.6.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-tweakwcs): Update to 0.8.6. Change-Id: Icfbb7680a5e208d68f5b8da3fa3fdd35a358ecf5
2024-01-24gnu: python-synphot: Enable more options.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-synphot) [propagated-inputs]: Add python-dust-extinction and python-specutils. Sort alphabetically. [native-inputs]: Add python-semantic-version. Change-Id: If4dbcf2765508d7c7e2b7580193367ed2d038b6f
2024-01-24gnu: Add python-specutils.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-specutils): New variable. Change-Id: Ic2ee65eb8a6fb7e5fe0d0d086541d47eef8bd1ad
2024-01-24gnu: Add python-dust-extinction.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-dust-extinction): New variable. Change-Id: I6fecfede0c347d032555b8f81bcf4f7072fc1129
2024-01-24gnu: Add python-ndcube.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-ndcube): New variable. Change-Id: I94087c7e02ca678531bcbf4eb3d035e2647768fd
2024-01-24gnu: python-sunpy: Update to 5.1.1.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-sunpy): Update to 5.1.1. [arguments]<#:test-flags>: Ignore test_spice.py as SpicePy is not packed yet and python-spicepy is optional. <#:phases>{prepare-test-environment}: Add pytest.ini configuration file to fix tests. Change-Id: Icfb05ce29b376a05291e9f7020170e389d0081d2
2024-01-24gnu: python-stcal: Update to 1.5.2.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-stcal): Update to 1.5.2. [propagated-inputs]: Add python-asdf-3.0 and python-gwcs. [native-inputs]: Remove python-cython; add python-cython-3 and python-semantic-version. Change-Id: I8b6a90a3c0b75ee43de4c7069950a4f9578ea825
2024-01-24gnu: python-pyvo: Update to 1.5.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-pyvo): Update to 1.5. [propagated-inputs]: Remove python-mimeparse. Change-Id: I4d3e19b95c034cf3c82cec55a198d9a927934971
2024-01-24gnu: python-drms: Update to 0.7.1.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-drms): Update to 0.7.1. Change-Id: I3744efa8c87db7fcb743bf8dca4ec6a437a82951
2024-01-24gnu: python-crds: Update to 11.17.14.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-crds): Update to 11.17.14. [description]: Indent it and apply TexInfo style on URLs. Change-Id: Icd298578cf685cfbc454d5b16b9f89c6d050b93a
2024-01-24gnu: libxisf: Update to 0.2.11.Sharlatan Hellseher
* gnu/packages/astronomy.scm (libxisf): Update to 0.2.11. Change-Id: I79242d42af3db660c46be0baf05e11ea7ac680f7
2024-01-24gnu: gpredict: Update home-page and description.Sharlatan Hellseher
* gnu/packages/astronomy.scm (gpredict)[home-page]: Update it according to project's README. [description]: Add feature detailed list. Change-Id: If5edc6e50796c7753ac47fac082c267145723361
2024-01-24gnu: indi-2.0: Update to 2.0.5.Sharlatan Hellseher
* gnu/packages/astronomy.scm (indi-2.0): Update to 2.0.5. Change-Id: I9cea7e7d11af5a142066f11a2185eb826570afb5
2024-01-24gnu: stellarium: Update to 23.4.Sharlatan Hellseher
* gnu/packages/astronomy.scm (stellarium): Update to 23.4. [inputs]: Add nlopt. Change-Id: Id205ad84ff75a687f6c1fdababcf3040c0c55abd
2024-01-24gnu: python-pytorch-geometric: Disable one test.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-pytorch-geometric)[arguments]: Disable test_gdc as it occasionally fails. Change-Id: I9d1dc1b68628801ea1bb5a8bdfa17063990748ea
2024-01-24gnu: libdispatch: Update to 5.9.2.Efraim Flashner
* gnu/packages/c.scm (libdispatch): Update to 5.9.2. Change-Id: I119d1de974673aa2c08eb51a7bcaa7ce24aeb0b2
2024-01-24gnu: range-v3: Update to 0.12.0.Efraim Flashner
* gnu/packages/cpp.scm (range-v3): Update to 0.12.0. [source]: Remove patch. * gnu/packages/patches/range-v3-build-with-gcc10.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Change-Id: I078937f9aff0da31ede8d472d8739e48bb775c55
2024-01-24gnu: range-v3: Format with 'guix style'.Efraim Flashner
* gnu/packages/cpp.scm (range-v3): Format with 'guix style'. Change-Id: I249443e5e5d0f7ef49e33de4f140246a862101d2
2024-01-24gnu: range-v3: Build with newer gcc.Efraim Flashner
* gnu/packages/cpp.scm (range-v3)[native-inputs]: Remove gcc-9. Change-Id: I0411d5db3e3df15c6df0a9a010d311fe1c80015c
2024-01-24gnu: python-xgboost: Fix build.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-xgboost)[build-system]: Use pyproject-build-system. [arguments]: Move test flags to #:test-flags; disable a few more tests, mostly to account for a removed dataset; use G-expression; remove custom 'check phase. Change-Id: I6841a8c159919df85acaa8558248a8775ec5be80
2024-01-24gnu: webkitgtk: Update to 2.42.4 [fixes CVE-2023-42883].Andre A. Gomes
* gnu/packages/webkit.scm (webkitgtk): Update to 2.42.4. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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